On-Line Electrochemistry/Electrospray Ionization Mass Spectrometry (EC/ESI-MS) for the Generation and Identification of Nucleotide Oxidation Products

The oxidation behavior of DNA and RNA nucleotides is studied by an on-line set-up consisting of an electrochemical, (ESI-MS). This set-up allows the thin-layer cell (EC) directly coupled to clectrospray ionization mass spectrometry generation of nucleotide oxidation products in the electrochemical cell at increasing potentials. Moreover, the products are determined directly, without isolation or derivatization steps, by electrospray ionization time of flight mass spectrometry (ESI-ToF/MS). The dependence of the mass spectra on the applied potential is displayed as 'mass voltammograms'. An advanced set-up, consisting of the electrochemical cell coupled to electrospray ionization tandem mass spectrometry (EC/ESI-MS/MS) allows further structure elucidation based on fragmentation experiments. The electrochemical conversion is performed using a boron doped diamond (BDD) working electrode, which is known to generate hydroxyl radicals at high potentials. The capability of the EC-MS system to generate highly relevant oxidation products which also occur upon oxidative damage in vivo is demonstrated in this Study by the formation of well known biomarkers for DNA damage, including 2'-deoxy-8-oxo-guanosine 5'-monophosphate.