Comparison of the non-radiative decay mechanisms of 4-pyrimidinone and uracil: an ab initio study

被引:61
作者
Delchev, Vassil B. [1 ]
Sobolewski, Andrzej L. [2 ]
Domcke, Wolfgang [1 ]
机构
[1] Tech Univ Munich, Dept Chem, D-85747 Garching, Germany
[2] Polish Acad Sci, Inst Phys, PL-02668 Warsaw, Poland
关键词
3-STATE CONICAL INTERSECTIONS; EXCITED-STATE DYNAMICS; AQUEOUS-SOLUTION; ULTRAFAST DECAY; ELECTRONIC-SPECTRA; PYRIMIDINE-BASES; GAS-PHASE; CYTOSINE; THYMINE; MODEL;
D O I
10.1039/b922505f
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We performed a comparative theoretical study of the relaxation mechanisms of the excited states of uracil and 4-pyrimidinone with the CASSCF, CASPT2, and CC2 ab initio methods. The calculated vertical excitation energies agree with the experimental UV absorption maxima of the two compounds. Three low-lying conical intersections between the S-0 and S-1 states (one for uracil, two for 4-pyrimidinone) are established. They are accessible from the Franck-Condon region of the (1)pi pi* state through out-of-plane deformations related to C=C (for uracil) or C=N (for 4-pyrimidinone) torsions of the heterocyclic ring. These conical intersections mediate the radiationless deactivation of the compounds after excitation of the lowest (1)pi pi* state. The relaxation of the (1)pi pi* state of 4-pyrimidinone via C=C twisting is hindered by a barrier. The relaxed scan of the C=N double-bond twisting of 4-pyrimidinone indicates that the formation of the Dewar form may represent a photochemical channel in 4-pyrimidinone. This fact is detrimental for the photostability of 4-pyrimidinone, since the Dewar form is separated by a high potential-energy barrier from the canonical form of 4-pyrimidinone on the ground-state potential-energy surface, which prevents a thermal back-reaction. The investigation of the vertical excitation energies and the reaction paths shows that 4-pyrimidinone is less photostable than uracil.
引用
收藏
页码:5007 / 5015
页数:9
相关论文
共 41 条
[1]   ELECTRONIC-STRUCTURE CALCULATIONS ON WORKSTATION COMPUTERS - THE PROGRAM SYSTEM TURBOMOLE [J].
AHLRICHS, R ;
BAR, M ;
HASER, M ;
HORN, H ;
KOLMEL, C .
CHEMICAL PHYSICS LETTERS, 1989, 162 (03) :165-169
[2]   Singlet excited-state dynamics of 5-fluorocytosine and cytosine: An experimental and computational study [J].
Blancafort, L ;
Cohen, B ;
Hare, PM ;
Kohler, B ;
Robb, MA .
JOURNAL OF PHYSICAL CHEMISTRY A, 2005, 109 (20) :4431-4436
[3]   Key role of a threefold state crossing in the ultrafast decay of electronically excited cytosine [J].
Blancafort, L ;
Robb, MA .
JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (47) :10609-10614
[4]   THE ELECTRONIC-SPECTRA OF THE PYRIMIDINE-BASES URACIL AND THYMINE IN A SUPERSONIC MOLECULAR-BEAM [J].
BRADY, BB ;
PETEANU, LA ;
LEVY, DH .
CHEMICAL PHYSICS LETTERS, 1988, 147 (06) :538-543
[5]   ELECTRONIC STATES AND LUMINESCENCE OF NUCLEIC-ACID SYSTEMS [J].
CALLIS, PR .
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 1983, 34 :329-357
[6]   Excited states dynamics of DNA and RNA bases: Characterization of a stepwise deactivation pathway in the gas phase [J].
Canuel, C ;
Mons, M ;
Piuzzi, F ;
Tardivel, B ;
Dimicoli, I ;
Elhanine, M .
JOURNAL OF CHEMICAL PHYSICS, 2005, 122 (07)
[7]   A Computational Study on the Mechanism of Intramolecular Oxo-Hydroxy Phototautomerism Driven by Repulsive πσ* State [J].
Chmura, Bartosz ;
Rode, Michal F. ;
Sobolewski, Andrzej L. ;
Lapinski, Leszek ;
Nowak, Maciej J. .
JOURNAL OF PHYSICAL CHEMISTRY A, 2008, 112 (51) :13655-13661
[8]   THE 2ND-ORDER APPROXIMATE COUPLED-CLUSTER SINGLES AND DOUBLES MODEL CC2 [J].
CHRISTIANSEN, O ;
KOCH, H ;
JORGENSEN, P .
CHEMICAL PHYSICS LETTERS, 1995, 243 (5-6) :409-418
[9]   VAPOR SPECTRA AND HEATS OF VAPORIZATION OF SOME PURINE AND PYRIMIDINE BASES [J].
CLARK, LB ;
PESCHEL, GG ;
TINOCO, I .
JOURNAL OF PHYSICAL CHEMISTRY, 1965, 69 (10) :3615-&
[10]   Strickler-Berg analysis of excited singlet state dynamics in DNA and RNA nucleosides [J].
Cohen, B ;
Crespo-Hernández, CE ;
Kohler, B .
FARADAY DISCUSSIONS, 2004, 127 :137-147