Statistical Indices for Simultaneous Large-Scale Metabolite Detections for a Single NMR Spectrum

被引：106

作者：

Chikayama, Eisuke ^{[1
]}

Sekiyama, Yasuyo ^{[1
]}

Okamoto, Mami ^{[2
]}

Nakanishi, Yumiko ^{[2
]}

Tsuboi, Yuuri ^{[3
]}

Akiyama, Kenji ^{[1
]}

Saito, Kazuki ^{[1
,4
]}

Shinozaki, Kazuo ^{[1
]}

Kikuchi, Jun ^{[1
,2
,5
]}

机构：

[1] RIKEN, Plant Sci Ctr, Metabolome Res Grp, Tsurumi Ku, Kanagawa 2300045, Japan

[2] Yokohama City Univ, Grad Sch Nanobiosci, Tsurumi Ku, Kanagawa 2300045, Japan

[3] RIKEN, Adv Sci Inst, Wako, Saitama 3510198, Japan

[4] Chiba Univ, Grad Sch Pharmaceut Sci, Inage Ku, Chiba 2638522, Japan

[5] Nagoya Univ, Grad Sch Bioagr Sci, Chikusa Ku, Nagoya, Aichi 4640810, Japan

来源：

ANALYTICAL CHEMISTRY | 2010年 / 82卷 / 05期

基金：

日本科学技术振兴机构;

关键词：

TOTAL CORRELATION SPECTROSCOPY; ARABIDOPSIS-THALIANA; METABOLOMICS; IDENTIFICATION; MIXTURES; PLANT; METABONOMICS; GENOMICS; REVEALS; SYSTEM;

D O I：

10.1021/ac9022023

中图分类号：

O65 [分析化学];

学科分类号：

070302 ; 081704 ;

摘要：

NMR-based metabolomics has become a practical and analytical methodology for discovering novel genes, biomarkers, metabolic phenotypes, and dynamic cell behaviors in organisms. Recent developments in NMR-based metabolomics, however, have not concentrated on improvements of comprehensiveness in terms of simultaneous large-scale metabolite detections. To resolve this, we have devised and implemented a statistical index, the SpinAssign p-value, in NMR-based metabolomics for large-scale metabolite annotation and publicized this information. It enables simultaneous annotation of more than 200 candidate metabolites from the single C-13-HSQC (heteronuclear single quantum coherence) NMR spectrum of a single sample of cell extract.

引用

页码：1653 / 1658

页数：6

共 55 条

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