A new soybean rust resistance allele from PI 423972 at the Rpp4 locus

被引:9
作者
King, Zachary R. [1 ]
Childs, Silas P. [1 ]
Harris, Donna K. [1 ]
Pedley, Kerry F. [2 ]
Buck, James W. [3 ]
Boerma, H. Roger [1 ]
Li, Zenglu [1 ]
机构
[1] Univ Georgia, Inst Plant Breeding Genet & Genom, Athens, GA 30602 USA
[2] USDA ARS, Foreign Dis Weed Sci Res Unit, Frederick, MD 21702 USA
[3] Univ Georgia, Dept Plant Pathol, Griffin, GA 30223 USA
关键词
Bulked segregant analysis (BSA); Haplotype analysis; Linkage mapping; Resistance to Phakopsora pachyrhizi (Rpp) gene; Single-nucleotide polymorphism(SNP); Soybean rust (SBR); BULKED SEGREGANT ANALYSIS; PHAKOPSORA-PACHYRHIZI; UNITED-STATES; GERMPLASM ACCESSIONS; PATHOGENIC VARIATION; CONFERS RESISTANCE; CANDIDATE GENES; IDENTIFICATION; POPULATIONS; CONFIRMATION;
D O I
10.1007/s11032-017-0658-0
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Phakopsora pachyrhizi is a fungal pathogen and the cause of Asian soybean rust. P. pachyrhizi was first detected in the continental USA in 2004 and has since been a threat to the soybean industry. There are six described loci that harbor resistance to P. pachyrhizi (Rpp) genes. The resistance of PI 423972 was previously shown to be within 5 cM of the Rpp4 locus of PI 459025B, yet had differential reactions when challenged with P. pachyrhizi isolates India 1973 and Taiwan 1972. In this study, the resistance of PI 423972 was mapped to a 187.5 kb interval between the SNP markers GSM0543 and GSM0387 on chromosome 18 (51,397,064 to 51,584,617 bp, Glyma.Wm82.a2) that overlaps the interval for Rpp4 and is designated as Rpp4-b. A unique haplotype is described for PI 423972 that separates it from PI 459025B, 32 North American soybean ancestors, and all described sources of Rpp gene resistance.
引用
收藏
页数:12
相关论文
共 60 条
[1]   Pathogenic diversity of soybean rust in Argentina, Brazil, and Paraguay [J].
Akamatsu, Hajime ;
Yamanaka, Naoki ;
Yamaoka, Yuichi ;
Soares, Rafael Moreira ;
Morel, Wilfrido ;
Gerardo Ivancovich, Antonio Juan ;
Noelia Bogado, Alicia ;
Kato, Masayasu ;
Yorinori, Jose Tadashi ;
Suenaga, Kazuhiro .
JOURNAL OF GENERAL PLANT PATHOLOGY, 2013, 79 (01) :28-40
[2]   Fine mapping and identification of candidate genes controlling the resistance to southern root-knot nematode in PI 96354 [J].
Anh-Tung Pham ;
McNally, Kaitlin ;
Abdel-Haleem, Hussein ;
Boerma, H. Roger ;
Li, Zenglu .
THEORETICAL AND APPLIED GENETICS, 2013, 126 (07) :1825-1838
[3]   Registration of 'Prichard' soybean [J].
Boerma, HR ;
Hussey, RS ;
Phillips, DV ;
Wood, ED ;
Rowan, GB ;
Finnerty, SL ;
Griner, JT .
CROP SCIENCE, 2001, 41 (03) :920-921
[4]   Evaluation of virulence of Phakopsora pachyrhizi and P-meibomiae isolates [J].
Bonde, M. R. ;
Nester, S. E. ;
Austin, C. N. ;
Stone, C. L. ;
Frederick, R. D. ;
Hartman, G. L. ;
Miles, M. R. .
PLANT DISEASE, 2006, 90 (06) :708-716
[5]  
Bromfield KR., 1984, Soybean Rust
[6]   Mapping and Confirmation of a New Allele at Rpp1 from Soybean PI 594538A Conferring RB Lesion-Type Resistance to Soybean Rust [J].
Chakraborty, Nanda ;
Curley, Joe ;
Frederick, Reid D. ;
Hyten, David L. ;
Nelson, Randall L. ;
Hartman, Glen L. ;
Diers, Brian W. .
CROP SCIENCE, 2009, 49 (03) :783-790
[7]   Molecular mapping of soybean rust (Phakopsora pachyrhizi) resistance genes:: discovery of a novel locus and alleles [J].
Garcia, Alexandre ;
Calvo, Eberson Sanches ;
de Souza Kiihl, Romeu Afonso ;
Harada, Arlindo ;
Hiromoto, Dario Minoru ;
Esteves Vieira, Luiz Gonzaga .
THEORETICAL AND APPLIED GENETICS, 2008, 117 (04) :545-553
[8]   GENETIC BASE FOR NORTH-AMERICAN PUBLIC SOYBEAN CULTIVARS RELEASED BETWEEN 1947 AND 1988 [J].
GIZLICE, Z ;
CARTER, TE ;
BURTON, JW .
CROP SCIENCE, 1994, 34 (05) :1143-1151
[9]   Asian soybean rust in Brazil: past, present, and future [J].
Godoy, Claudia Vieira ;
Santos Seixas, Claudine Dinali ;
Soares, Rafael Moreira ;
Correa Marcelino-Guimaraes, Franscismar ;
Meyer, Mauricio Conrado ;
Costamilan, Leila Maria .
PESQUISA AGROPECUARIA BRASILEIRA, 2016, 51 (05) :407-421
[10]   Identification of Unique Genetic Sources of Soybean Rust Resistance from the USDA Soybean Germplasm Collection [J].
Harris, Donna K. ;
Kendrick, Mandy D. ;
King, Zachary R. ;
Pedley, Kerry F. ;
Walker, David R. ;
Cregan, Perry B. ;
Buck, James W. ;
Phillips, Daniel V. ;
Li, Zenglu ;
Boerma, H. Roger .
CROP SCIENCE, 2015, 55 (05) :2161-2176