Assessing model adequacy leads to more robust phylogeographic inference

被引:9
作者
Carstens, Bryan C. [1 ]
Smith, Megan L. [2 ]
Duckett, Drew J. [1 ]
Fonseca, Emanuel M. [1 ]
Thome, M. Tereza C. [1 ]
机构
[1] Ohio State Univ, Dept Evolut Ecol & Organismal Biol, Columbus, OH 43210 USA
[2] Indiana Univ, Dept Biol, Bloomington, IN USA
基金
美国国家科学基金会;
关键词
APPROXIMATE BAYESIAN COMPUTATION; POSTERIOR PREDICTIVE CHECKS; EXPLORATORY DATA-ANALYSIS; MULTISPECIES COALESCENT; GENE FLOW; OF-FIT; HISTORY; DEMOGRAPHY; SELECTION; SEQUENCE;
D O I
10.1016/j.tree.2021.12.007
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Phylogeographic studies base inferences on large data sets and complex demographic models, but these models are applied in ways that could mislead researchers and compromise their inference. Researchers face three challenges associated with the use of models: (i) 'model selection', or the identification of an appropriate model for analysis; (ii) 'evaluation of analytical results', or the interpretation of the biological significance of the resulting parameter estimates, delimitations, and topologies; and (iii) 'model evaluation', or the use of statistical approaches to assess the fit of the model to the data. The field collectively invests most of its energy in point (ii) without considering the other points; we argue that attention to points (i) and (iii) is essential to phylogeographic inference.
引用
收藏
页码:402 / 410
页数:9
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