Validating deep learning inference during chest X-ray classification for COVID-19 screening

被引:30
作者
Sadre, Robbie [1 ]
Sundaram, Baskaran [2 ]
Majumdar, Sharmila [3 ]
Ushizima, Daniela [1 ,3 ,4 ]
机构
[1] Lawrence Berkeley Natl Lab, Computat Res Div, Berkeley, CA 94720 USA
[2] Thomas Jefferson Univ Hosp, Dept Radiol, Philadelphia, PA 19107 USA
[3] Univ Calif San Francisco, Inst Computat Hlth Sci, San Francisco, CA 94117 USA
[4] Univ Calif Berkeley, Berkeley Inst Data Sci, Berkeley, CA 94720 USA
关键词
D O I
10.1038/s41598-021-95561-y
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The new coronavirus unleashed a worldwide pandemic in early 2020, and a fatality rate several times that of the flu. As the number of infections soared, and capabilities for testing lagged behind, chest X-ray (CXR) imaging became more relevant in the early diagnosis and treatment planning for patients with suspected or confirmed COVID-19 infection. In a few weeks, proposed new methods for lung screening using deep learning rapidly appeared, while quality assurance discussions lagged behind. This paper proposes a set of protocols to validate deep learning algorithms, including our ROI Hide-and-Seek protocol, which emphasizes or hides key regions of interest from CXR data. Our protocol allows assessing the classification performance for anomaly detection and its correlation to radiological signatures, an important issue overlooked in several deep learning approaches proposed so far. By running a set of systematic tests over CXR representations using public image datasets, we demonstrate the weaknesses of current techniques and offer perspectives on the advantages and limitations of automated radiography analysis when using heterogeneous data sources.
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页数:10
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