State of Art of Cancer Pharmacogenomics in Latin American Populations

被引:26
作者
Lopez-Cortes, Andres [1 ]
Guerrero, Santiago [2 ]
Ana Redal, Maria [3 ]
Tito Alvarado, Angel [4 ]
Abel Quinones, Luis [5 ]
机构
[1] Univ Tecnol Equinoccial, Fac Ciencias Salud Eugenio Espejo, Ctr Invest Genet & Genom, Quito 170527, Ecuador
[2] Univ Pompeu Fabra, Barcelona Inst Sci & Technol, Ctr Genom Regulat CRG, Gene Regulat Stem Cells & Canc Programme, Barcelona 08003, Spain
[3] Univ Buenos Aires, Ctr Diagnost Mol, MEDgen, Inst Fisiopatol & Bioquim Clin,Fac Farm & Bioquim, RA-10001499 Buenos Aires, DF, Argentina
[4] Univ San Martin de Porres, Fac Med, Unidad Bioequivalencia & Med Personalizada, Lima 12, Peru
[5] Univ Chile, Fac Med, Dept Basic Clin Oncol, Lab Chem Carcinogenesis & Pharmacogenet, Santiago 70111, Chile
关键词
cancer; single nucleotide polymorphism; precision medicine; Latin America; pharmacogenetics; pharmacogenomics; CODON; 72; POLYMORPHISM; THIOPURINE S-METHYLTRANSFERASE; GSTM1 GENETIC POLYMORPHISMS; ANDROGEN RECEPTOR GENE; CELL LUNG-CANCER; PROSTATE-CANCER; BRCA2; MUTATIONS; COLORECTAL-CANCER; BREAST-CANCER; GASTRIC-CANCER;
D O I
10.3390/ijms18060639
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Over the past decades, several studies have shown that tumor-related somatic and germline alterations predicts tumor prognosis, drug response and toxicity. Latin American populations present a vast geno-phenotypic diversity due to the great interethnic and interracial mixing. This genetic flow leads to the appearance of complex characteristics that allow individuals to adapt to endemic environments, such as high altitude or extreme tropical weather. These genetic changes, most of them subtle and unexplored, could establish a mutational profile to develop new pharmacogenomic therapies specific for Latin American populations. In this review, we present the current status of research on somatic and germline alterations in Latin America compared to those found in Caucasian and Asian populations.
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页数:22
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共 173 条
[1]   Phage Therapy: Eco-Physiological Pharmacology [J].
Abedon, Stephen T. .
SCIENTIFICA, 2014, 2014
[2]   Perception of the Usefulness of Drug/Gene Pairs and Barriers for Pharmacogenomics in Latin America [J].
Abel Quinones, Luis ;
Alejandra Lavanderos, Maria ;
Pablo Cayun, Juan ;
Garcia-Martin, Elena ;
Augusto Agundez, Jose ;
Daniel Caceres, Dante ;
Margarita Roco, Angela ;
Morales, Jorge E. ;
Herrera, Luisa ;
Encina, Gonzalo ;
Alberto Isaza, Carlos ;
Ana Redal, Maria ;
Larovere, Laura ;
Walter Soria, Nestor ;
Eslava-Schmalbach, Javier ;
Castaneda-Hernandez, Gilberto ;
Lopez-Cortes, Andres ;
Magno, Luiz Alexandre ;
Lopez, Marisol ;
Angel Chiurillo, Miguel ;
Rodeiro, Idania ;
Castro de Guerra, Dinorah ;
Teran, Enrique ;
Estevez-Carrizo, Francisco ;
Lares-Assef, Ismael .
CURRENT DRUG METABOLISM, 2014, 15 (02) :202-208
[3]   Prevalence of BRCA1 and BRCA2 mutations in unselected breast cancer patients from Peru [J].
Abugattas, J. ;
Llacuachaqui, M. ;
Allende, Y. Sullcahuaman ;
Velasquez, A. Arias ;
Velarde, R. ;
Cotrina, J. ;
Garces, M. ;
Leon, M. ;
Calderon, G. ;
de la Cruz, M. ;
Mora, P. ;
Royer, R. ;
Herzog, J. ;
Weitzel, J. N. ;
Narod, S. A. .
CLINICAL GENETICS, 2015, 88 (04) :371-375
[4]   Positive correlation between single or combined genotypes of CYP1A1 and GSTM1 in relation to prostate cancer in Chilean people [J].
Acevedo, C ;
Opazo, JL ;
Huidobro, C ;
Cabezas, J ;
Iturrieta, J ;
Sepúlveda, LQ .
PROSTATE, 2003, 57 (02) :111-117
[5]   Cetuximab therapy in first-line metastatic colorectal cancer and intermittent palliative chemotherapy: review of the COIN trial [J].
Adams, Richard ;
Meade, Angela ;
Wasan, Harpreet ;
Griffiths, Gareth ;
Maughan, Tim .
EXPERT REVIEW OF ANTICANCER THERAPY, 2008, 8 (08) :1237-1245
[6]   Genomic Classification of Cutaneous Melanoma [J].
Akbani, Rehan ;
Akdemir, Kadir C. ;
Aksoy, B. Arman ;
Albert, Monique ;
Ally, Adrian ;
Amin, Samirkumar B. ;
Arachchi, Harindra ;
Arora, Arshi ;
Auman, J. Todd ;
Ayala, Brenda ;
Baboud, Julien ;
Balasundaram, Miruna ;
Balu, Saianand ;
Barnabas, Nandita ;
Bartlett, John ;
Bartlett, Pam ;
Bastian, Boris C. ;
Baylin, Stephen B. ;
Behera, Madhusmita ;
Belyaev, Dmitry ;
Benz, Christopher ;
Bernard, Brady ;
Beroukhim, Rameen ;
Bir, Natalie ;
Black, Aaron D. ;
Bodenheimer, Tom ;
Boice, Lori ;
Boland, Genevieve M. ;
Bono, Riccardo ;
Bootwalla, Moiz S. ;
Bosenberg, Marcus ;
Bowen, Jay ;
Bowlby, Reanne ;
Bristow, Christopher A. ;
Brockway-Lunardi, Laura ;
Brooks, Denise ;
Brzezinski, Jakub ;
Bshara, Wiam ;
Buda, Elizabeth ;
Burns, William R. ;
Butterfield, Yaron S. N. ;
Button, Michael ;
Calderone, Tiffany ;
Cappellini, Giancarlo Antonini ;
Carter, Candace ;
Carter, Scott L. ;
Cherney, Lynn ;
Cherniack, Andrew D. ;
Chevalier, Aaron ;
Chin, Lynda .
CELL, 2015, 161 (07) :1681-1696
[7]   The spectrum of BRCA1 and BRCA2 mutations in breast cancer patients in the Bahamas [J].
Akbari, M. R. ;
Donenberg, T. ;
Lunn, J. ;
Curling, D. ;
Turnquest, T. ;
Krill-Jackson, E. ;
Zhang, S. ;
Narod, S. A. ;
Hurley, J. .
CLINICAL GENETICS, 2014, 85 (01) :64-67
[8]   A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing [J].
Alioto, Tyler S. ;
Buchhalter, Ivo ;
Derdak, Sophia ;
Hutter, Barbara ;
Eldridge, Matthew D. ;
Hovig, Eivind ;
Heisler, Lawrence E. ;
Beck, Timothy A. ;
Simpson, Jared T. ;
Tonon, Laurie ;
Sertier, Anne-Sophie ;
Patch, Ann-Marie ;
Jaeger, Natalie ;
Ginsbach, Philip ;
Drews, Ruben ;
Paramasivam, Nagarajan ;
Kabbe, Rolf ;
Chotewutmontri, Sasithorn ;
Diessl, Nicolle ;
Previti, Christopher ;
Schmidt, Sabine ;
Brors, Benedikt ;
Feuerbach, Lars ;
Heinold, Michael ;
Groebner, Susanne ;
Korshunov, Andrey ;
Tarpey, Patrick S. ;
Butler, Adam P. ;
Hinton, Jonathan ;
Jones, David ;
Menzies, Andrew ;
Raine, Keiran ;
Shepherd, Rebecca ;
Stebbings, Lucy ;
Teague, Jon W. ;
Ribeca, Paolo ;
Giner, Francesc Castro ;
Beltran, Sergi ;
Raineri, Emanuele ;
Dabad, Marc ;
Heath, Simon C. ;
Gut, Marta ;
Denroche, Robert E. ;
Harding, Nicholas J. ;
Yamaguchi, Takafumi N. ;
Fujimoto, Akihiro ;
Nakagawa, Hidewaki ;
Quesada, Ctor ;
Valdes-Mas, Rafael ;
Nakken, Sigve .
NATURE COMMUNICATIONS, 2015, 6
[9]   A haplotype map of the human genome [J].
Altshuler, D ;
Brooks, LD ;
Chakravarti, A ;
Collins, FS ;
Daly, MJ ;
Donnelly, P ;
Gibbs, RA ;
Belmont, JW ;
Boudreau, A ;
Leal, SM ;
Hardenbol, P ;
Pasternak, S ;
Wheeler, DA ;
Willis, TD ;
Yu, FL ;
Yang, HM ;
Zeng, CQ ;
Gao, Y ;
Hu, HR ;
Hu, WT ;
Li, CH ;
Lin, W ;
Liu, SQ ;
Pan, H ;
Tang, XL ;
Wang, J ;
Wang, W ;
Yu, J ;
Zhang, B ;
Zhang, QR ;
Zhao, HB ;
Zhao, H ;
Zhou, J ;
Gabriel, SB ;
Barry, R ;
Blumenstiel, B ;
Camargo, A ;
Defelice, M ;
Faggart, M ;
Goyette, M ;
Gupta, S ;
Moore, J ;
Nguyen, H ;
Onofrio, RC ;
Parkin, M ;
Roy, J ;
Stahl, E ;
Winchester, E ;
Ziaugra, L ;
Shen, Y .
NATURE, 2005, 437 (7063) :1299-1320
[10]   A global reference for human genetic variation [J].
Altshuler, David M. ;
Durbin, Richard M. ;
Abecasis, Goncalo R. ;
Bentley, David R. ;
Chakravarti, Aravinda ;
Clark, Andrew G. ;
Donnelly, Peter ;
Eichler, Evan E. ;
Flicek, Paul ;
Gabriel, Stacey B. ;
Gibbs, Richard A. ;
Green, Eric D. ;
Hurles, Matthew E. ;
Knoppers, Bartha M. ;
Korbel, Jan O. ;
Lander, Eric S. ;
Lee, Charles ;
Lehrach, Hans ;
Mardis, Elaine R. ;
Marth, Gabor T. ;
McVean, Gil A. ;
Nickerson, Deborah A. ;
Wang, Jun ;
Wilson, Richard K. ;
Boerwinkle, Eric ;
Doddapaneni, Harsha ;
Han, Yi ;
Korchina, Viktoriya ;
Kovar, Christie ;
Lee, Sandra ;
Muzny, Donna ;
Reid, Jeffrey G. ;
Zhu, Yiming ;
Chang, Yuqi ;
Feng, Qiang ;
Fang, Xiaodong ;
Guo, Xiaosen ;
Jian, Min ;
Jiang, Hui ;
Jin, Xin ;
Lan, Tianming ;
Li, Guoqing ;
Li, Jingxiang ;
Li, Yingrui ;
Liu, Shengmao ;
Liu, Xiao ;
Lu, Yao ;
Ma, Xuedi ;
Tang, Meifang ;
Wang, Bo .
NATURE, 2015, 526 (7571) :68-+