Analysis of bovine colostrum microbiota at a dairy farm in Ningxia, China

被引：2

作者：

Xie, Xiu-lan ^{[1
,2
]}

Zhang, Gang ^{[3
]}

Gao, Hai-hui ^{[2
]}

Deng, Ke-xin ^{[3
]}

Chu, Yue-feng ^{[4
]}

Wu, Dao-yan ^{[1
]}

Yan, Shi-ying ^{[1
]}

Zhou, Jie ^{[1
]}

Zhao, Jian ^{[1
]}

机构：

[1] Sichuan Univ, Coll Life Sci, Key Lab Biol Resource & Ecol Environm, Chinese Educ Minist, Chengdu 610064, Peoples R China

[2] Ningxia Acad Agr & Forestry Sci, Inst Anim Sci, Yinchuan 75002, Ningxia, Peoples R China

[3] Ningxia Univ, Coll Life Sci, Dept Biochem & Mol Biol, Key Lab,Minist Educ Protect & Utilisat Special Bi, Yinchuan 750021, Ningxia, Peoples R China

[4] Chinese Acad Agr Sci, Lanzhou Vet Res Inst, State Key Lab Vet Etiol Biol, Lanzhou 730046, Peoples R China

来源：

INTERNATIONAL DAIRY JOURNAL | 2021年 / 119卷

关键词：

HUMAN-MILK; CLINICAL MASTITIS; SAMPLES; COWS;

D O I：

10.1016/j.idairyj.2021.104984

中图分类号：

TS2 [食品工业];

学科分类号：

0832 ;

摘要：

Bovine colostrum samples were collected from 9 healthy cows at 4 time points (0, 1, 2, and 6 d after calving) at a dairy farm in Ningxia, China, and the bacterial diversity was explored using 16S rRNA pyrosequencing. Colostrum samples were dominated by phyla of Firmicutes, Bacteroides, Proteobacteria, and Actinobacteria with 35 predominant genera, including Lactobacillus, Bacteroides, Escherichia_Shigella, Collinsella, Klebsiella, Alistipes, Clostridium_sensu_stricto_1, Prevotella_9, and Bifidobacterium. The core microbiota of bovine colostrum contained 58 genera and 5 species. The alpha and beta diversity analysis indicated bovine colostrum microbiota was stable at the first 3 days but changed at 6 d. At 6 d, the relative abundance of most predominant genera decreased, while Escherichia_Shigella, Acinetobacter, Lactococcus, and Streptococcus increased. (c) 2021 Elsevier Ltd. All rights reserved.

引用

页数：8

共 43 条

[1] Human milk oligosaccharide categories define the microbiota composition in human colostrum [J].

Aakko, J. ;

Kumar, H. ;

Rautava, S. ;

Wise, A. ;

Autran, C. ;

Bode, L. ;

Isolauri, E. ;

Salminen, S. .

BENEFICIAL MICROBES, 2017, 8 (04) :563-567

[2] The bovine milk microbiota: insights and perspectives from -omics studies [J].

Addis, M. F. ;

Tanca, A. ;

Uzzau, S. ;

Oikonomou, G. ;

Bicalho, R. C. ;

Moroni, P. .

MOLECULAR BIOSYSTEMS, 2016, 12 (08) :2359-2372

[3] The effects of feeding high or low milk levels in early life on growth performance, fecal microbial count and metabolic and inflammatory status of Holstein female calves [J].

Alimirzaei, M. ;

Alijoo, Y. A. ;

Dehghan-Banadaky, M. ;

Eslamizad, M. .

ANIMAL, 2020, 14 (02) :303-311

[4] Human Milk Composition Nutrients and Bioactive Factors [J].

Ballard, Olivia ;

Morrow, Ardythe L. .

PEDIATRIC CLINICS OF NORTH AMERICA, 2013, 60 (01) :49-+

[5]

de Amorim AM, 2017, J INFECT DEV COUNTR, V11, P111, DOI [10.3855/j.idc.8418, 10.3855/jidc.8418]

[6]

Boix-Amoros A, 2016, FRONT MICROBIOL, V7, DOI [10.5389/fmicb.7016.00492, 10.3389/fmicb.2016.00492]

[7] Trimmomatic: a flexible trimmer for Illumina sequence data [J].

Bolger, Anthony M. ;

Lohse, Marc ;

Usadel, Bjoern .

BIOINFORMATICS, 2014, 30 (15) :2114-2120

[8] The human milk microbiome changes over lactation and is shaped by maternal weight and mode of delivery [J].

Cabrera-Rubio, Raul ;

Carmen Collado, M. ;

Laitinen, Kirsi ;

Salminen, Seppo ;

Isolauri, Erika ;

Mira, Alex .

AMERICAN JOURNAL OF CLINICAL NUTRITION, 2012, 96 (03) :544-551

[9] QIIME allows analysis of high-throughput community sequencing data [J].

Caporaso, J. Gregory ;

Kuczynski, Justin ;

Stombaugh, Jesse ;

Bittinger, Kyle ;

Bushman, Frederic D. ;

Costello, Elizabeth K. ;

Fierer, Noah ;

Pena, Antonio Gonzalez ;

Goodrich, Julia K. ;

Gordon, Jeffrey I. ;

Huttley, Gavin A. ;

Kelley, Scott T. ;

Knights, Dan ;

Koenig, Jeremy E. ;

Ley, Ruth E. ;

Lozupone, Catherine A. ;

McDonald, Daniel ;

Muegge, Brian D. ;

Pirrung, Meg ;

Reeder, Jens ;

Sevinsky, Joel R. ;

Tumbaugh, Peter J. ;

Walters, William A. ;

Widmann, Jeremy ;

Yatsunenko, Tanya ;

Zaneveld, Jesse ;

Knight, Rob .

NATURE METHODS, 2010, 7 (05) :335-336

[10] Screening of surface properties and antagonistic substances production by lactic acid bacteria isolated from the mammary gland of healthy and mastitic cows [J].

Carolina Espeche, Maria ;

Claudia Otero, Maria ;

Sesma, Fernando ;

Fatima Nader-Macias, Maria Elena .

VETERINARY MICROBIOLOGY, 2009, 135 (3-4) :346-357

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