A combination of ATAC-seq and RNA-seq was used to study the downstream genes of FOXQ1 transcription factor in colorectal cancer

被引：0
|
作者：
Yi, M-J. [1 ,2 ]
Zhang, J-J. [3 ]
Tang, H. [2 ]
机构：
[1] Kunming Univ Sci & Technol, Kunming, Yunnan, Peoples R China
[2] Kunming Univ Sci & Technol, Affiliated Hosp, Peoples Hosp Yunnan Prov 1, Kunming, Yunnan, Peoples R China
[3] Chinese Acad Sci, Kunming Inst Zool, Kunming, Yunnan, Peoples R China
来源：
EUROPEAN JOURNAL OF IMMUNOLOGY | 2019年 / 49卷
关键词：
D O I：
暂无
中图分类号：
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号：
100102 ;
摘要：
P0569
引用
收藏
页码：1955 / 1956
页数：2
相关论文
共 50 条
  • [41] Genome-wide association study and RNA-seq identifies GmWRI1-like transcription factor related to the seed weight in soybean
    Di, Qin
    Dong, Lidong
    Jiang, Li
    Liu, Xiaoyi
    Cheng, Ping
    Liu, Baohui
    Yu, Guohui
    FRONTIERS IN PLANT SCIENCE, 2023, 14
  • [42] An integrative analysis of ATAC-seq and RNA-seq data in activated, CD4+CD45RO+CD196+ human T cells treated with IL-1 B and IL-23 with or without PGE2
    Wang, Ting
    Duerr, Richard H.
    Chen, Wei
    PROCEEDINGS OF THE 7TH ACM INTERNATIONAL CONFERENCE ON BIOINFORMATICS, COMPUTATIONAL BIOLOGY, AND HEALTH INFORMATICS, 2016, : 507 - 507
  • [43] Role of stemness-related genes TIMP1, PGF, and SNAI1 in the prognosis of colorectal cancer through single-cell RNA-seq
    Shen, Yan
    Ni, Siyi
    Li, Si
    Lv, Bin
    CANCER MEDICINE, 2023, 12 (10): : 11611 - 11623
  • [44] Transcription factor network analysis based on single cell RNA-seq identifies that Trichostatin-a reverses docetaxel resistance in prostate Cancer
    Patricia M. Schnepp
    Aqila Ahmed
    June Escara-Wilke
    Jinlu Dai
    Greg Shelley
    Jill Keller
    Atsushi Mizokami
    Evan T. Keller
    BMC Cancer, 21
  • [45] Transcription factor network analysis based on single cell RNA-seq identifies that Trichostatin-a reverses docetaxel resistance in prostate Cancer
    Schnepp, Patricia M.
    Ahmed, Aqila
    Escara-Wilke, June
    Dai, Jinlu
    Shelley, Greg
    Keller, Jill
    Mizokami, Atsushi
    Keller, Evan T.
    BMC CANCER, 2021, 21 (01)
  • [46] A Combination of RNA-Seq Analysis and Use of TCGA Database for Determining the Molecular Mechanism and Identifying Potential Drugs for GJB1 in Ovarian Cancer
    Yang, Jie
    Fan, Yaqin
    Xie, Beibei
    Yang, Dan
    ONCOTARGETS AND THERAPY, 2021, 14 : 2623 - 2633
  • [47] In silico RNA-seq and experimental analyses reveal the differential expression and splicing of EPDR1 and ZNF518B genes in relation to KRAS mutations in colorectal cancer cells
    Riffo-Campos, Angela L.
    Castillo, Josefa
    Vallet-Sanchez, Azahara
    Ayala, Guillermo
    Cervantes, Andres
    Lopez-Rodas, Gerardo
    Franco, Luis
    ONCOLOGY REPORTS, 2016, 36 (06) : 3627 - 3634
  • [48] Genome-wide RNA-seq analysis indicates that the DAG1 transcription factor promotes hypocotyl elongation acting on ABA, ethylene and auxin signaling
    Lorrai, Riccardo
    Gandolfi, Francesco
    Boccaccini, Alessandra
    Ruta, Veronica
    Possenti, Marco
    Tramontano, Anna
    Costantino, Paolo
    Lepore, Rosalba
    Vittorioso, Paola
    SCIENTIFIC REPORTS, 2018, 8
  • [49] Global gene expression analysis using RNA-seq uncovered a new role for SR1/CAMTA3 transcription factor in salt stress
    Kasavajhala V. S. K. Prasad
    Amira A. E. Abdel-Hameed
    Denghui Xing
    Anireddy S. N. Reddy
    Scientific Reports, 6
  • [50] Genome-wide RNA-seq analysis indicates that the DAG1 transcription factor promotes hypocotyl elongation acting on ABA, ethylene and auxin signaling
    Riccardo Lorrai
    Francesco Gandolfi
    Alessandra Boccaccini
    Veronica Ruta
    Marco Possenti
    Anna Tramontano
    Paolo Costantino
    Rosalba Lepore
    Paola Vittorioso
    Scientific Reports, 8
12345