Evolving interfaces via gradients of geometry-dependent interior Poisson problems: application to tumor growth

被引:70
作者
Macklin, P [1 ]
Lowengrub, J [1 ]
机构
[1] Univ Calif Irvine, Dept Math, Irvine, CA 92697 USA
基金
美国国家科学基金会;
关键词
moving boundary problems; level set method; tumor growth; interior Poisson problem; second-order accuracy; finite differences; ghost fluid method; curvature discretization; velocity extension; Gaussian filter;
D O I
10.1016/j.jcp.2004.08.010
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
We develop an algorithm for the evolution of interfaces whose normal velocity is given by the normal derivative of a solution to an interior Poisson equation with curvature-dependent boundary conditions. We improve upon existing techniques and develop new finite difference, ghost fluid/level set methods to attain full second-order accuracy for the first time in the context of a fully coupled, nonlinear moving boundary problem with geometric boundary conditions (curvature). The algorithm is capable of describing complex morphologies, including pinchoff and merger of interfaces. Our new methods include a robust, high-order boundary condition-capturing Poisson solver tailored to the interior problem, improved discretizations of the normal vector and curvature, a new technique for extending variables beyond the zero level set, a new orthogonal velocity extension technique that is both faster and more accurate than traditional PDE-based approaches, and a new application of Gaussian filter technology ordinarily associated with image processing. While our discussion focuses oil two-dimensional problems, the techniques presented can be readily extended to three dimensions. We apply our techniques to a model for tumor growth and present several 2D simulations. Our algorithm is validated by comparison to an exact solution, by resolution studies, and by comparison to the results of a spectrally accurate method boundary integral method (BIM). We go beyond morphologies that can be described by the BIM and present accurate simulations of complex, evolving tumor morphologies that demonstrate the repeated encapsulation of healthy tissue in the primary tumor domain - an effect seen in the growth of real tumors. (C) 2004 Elsevier Inc. All rights reserved.
引用
收藏
页码:191 / 220
页数:30
相关论文
共 38 条
[1]   The fast construction of extension velocities in level set methods [J].
Adalsteinsson, D ;
Sethian, JA .
JOURNAL OF COMPUTATIONAL PHYSICS, 1999, 148 (01) :2-22
[2]  
Adam J. A., 1996, SURVEY MODELS TUMOR, P15
[3]   Growth of necrotic tumors in the presence and absence of inhibitors [J].
Byrne, HM ;
Chaplain, MAJ .
MATHEMATICAL BIOSCIENCES, 1996, 135 (02) :187-216
[4]   Modelling the role of cell-cell adhesion in the growth and development of carcinoma [J].
Byrne, HM ;
Chaplain, MAJ .
MATHEMATICAL AND COMPUTER MODELLING, 1996, 24 (12) :1-17
[5]  
CHAPLAIN MAJ, 1999, GROWH FORM SPATIO TE
[6]   A simple level set method for solving Stefan problems [J].
Chen, S ;
Merriman, B ;
Osher, S ;
Smereka, P .
JOURNAL OF COMPUTATIONAL PHYSICS, 1997, 135 (01) :8-29
[7]   Nonlinear simulation of tumor growth [J].
Cristini, V ;
Lowengrub, J ;
Nie, Q .
JOURNAL OF MATHEMATICAL BIOLOGY, 2003, 46 (03) :191-224
[8]  
DONGARRA JJ, 1998, SOFTW ENVIRONM TOOL, P1
[9]  
Fedkiw RP, 1999, J COMPUT PHYS, V152, P457, DOI 10.1006/jcph.1999.6136
[10]  
FRIEBOES H, 2004, UNPUB DIFFUSIONAL IN