A subcellular map of the human proteome

被引:2041
作者
Thul, Peter J. [1 ]
Akesson, Lovisa [1 ]
Wiking, Mikaela [1 ]
Mahdessian, Diana [1 ]
Geladaki, Aikaterini [2 ,3 ]
Blal, Hammou Ait [1 ]
Alm, Tove [1 ]
Asplund, Anna [4 ]
Bjork, Lars [1 ]
Breckels, Lisa M. [2 ,5 ]
Backstrom, Anna [1 ]
Danielsson, Frida [1 ]
Fagerberg, Linn [1 ]
Fall, Jenny [1 ]
Gatto, Laurent [2 ,5 ]
Gnann, Christian [1 ]
Hober, Sophia [6 ]
Hjelmare, Martin [1 ]
Johansson, Fredric [1 ]
Lee, Sunjae [1 ]
Lindskog, Cecilia [4 ]
Mulder, Jan [7 ]
Mulvey, Claire M. [2 ]
Nilsson, Peter [1 ]
Oksvold, Per [1 ]
Rockberg, Johan [6 ]
Schutten, Rutger [1 ]
Schwenk, Jochen M. [1 ]
Sivertsson, Asa [1 ]
Sjostedt, Evelina [4 ]
Skogs, Marie [1 ]
Stadler, Charlotte [1 ]
Sullivan, Devin P. [1 ]
Tegel, Hanna [6 ]
Winsnes, Casper [1 ]
Zhang, Cheng [1 ]
Zwahlen, Martin [1 ]
Mardinoglu, Adil [1 ]
Ponten, Fredrik [4 ]
von Feilitzen, Kalle [1 ]
Lilley, Kathryn S. [2 ]
Uhlen, Mathias [1 ]
Lundberg, Emma [1 ]
机构
[1] KTH Royal Inst Technol, Sch Biotechnol, Sci Life Lab, SE-17121 Stockholm, Sweden
[2] Univ Cambridge, Dept Biochem, Cambridge Ctr Prote, Tennis Court Rd, Cambridge CB2 1QR, England
[3] Univ Cambridge, Dept Genet, Downing St, Cambridge CB2 3EH, England
[4] Uppsala Univ, Sci Life Lab, Genet & Pathol, Dept Immunol, SE-75185 Uppsala, Sweden
[5] Univ Cambridge, Dept Biochem, Computat Prote Unit, Tennis Court Rd, Cambridge CB2 1QR, England
[6] KTH Royal Inst Technol, Sch Biotechnol, Dept Prote, SE-10691 Stockholm, Sweden
[7] Karolinska Inst, Dept Neurosci, Sci Life Lab, SE-17177 Stockholm, Sweden
基金
英国惠康基金; 英国生物技术与生命科学研究理事会;
关键词
SIGNAL PEPTIDES; HUMAN PROTEINS; LOCALIZATION; SINGLE; IMMUNOFLUORESCENCE; VALIDATION; PREDICTION; SELECTION; DYNAMICS; RESOURCE;
D O I
10.1126/science.aal3321
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Resolving the spatial distribution of the human proteome at a subcellular level can greatly increase our understanding of human biology and disease. Here we present a comprehensive image-based map of subcellular protein distribution, the Cell Atlas, built by integrating transcriptomics and antibody-based immunofluorescence microscopy with validation by mass spectrometry. Mapping the in situ localization of 12,003 human proteins at a single-cell level to 30 subcellular structures enabled the definition of the proteomes of 13 major organelles. Exploration of the proteomes revealed single-cell variations in abundance or spatial distribution and localization of about half of the proteins to multiple compartments. This subcellular map can be used to refine existing protein-protein interaction networks and provides an important resource to deconvolute the highly complex architecture of the human cell.
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页数:13
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