Thermus thermophilus Proteins That Are Differentially Expressed in Response to Growth Temperature and Their Implication in Thermoadaptation

被引:15
作者
Li, Hebin [3 ]
Ji, Xinglai [4 ,5 ]
Zhou, Zhidong [3 ]
Wang, Yiqian [3 ]
Zhang, Xiaobo [1 ,2 ]
机构
[1] Zhejiang Univ, Coll Life Sci, Hangzhou 310058, Zhejiang, Peoples R China
[2] Zhejiang Univ, Key Lab Conservat Genet & Reprod Biol Wild Anim, Minist Educ, Hangzhou 310058, Zhejiang, Peoples R China
[3] State Ocean Adm, Key Lab Marine Biogenet Resources, Inst Oceanog 3, Xiamen 361005, Peoples R China
[4] Yunnan Univ, Lab Conservat & Utilizat Bioresources, Minist Educ, Kunming 650091, Peoples R China
[5] Yunnan Univ, Key Lab Microbial Resources, Minist Educ, Kunming 650091, Peoples R China
基金
中国国家自然科学基金;
关键词
Thermoadaptation; Thermus thermophilus; Protein; Pathway; COMPARATIVE GENOMICS; GEL-ELECTROPHORESIS; ADAPTATION; ANNOTATION; BLAST2GO; CLONING; TRAIT;
D O I
10.1021/pr900754y
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
As a kind of important extremophiles to realize the adaptation of life at high temperatures, thermophiles have attracted extensive studies. However, the pathways of thermophile proteins related to thermoadaptation remain to be addressed. Our study showed that there existed two types of protein profiles for the thermophile Thermus thermophilus wl in response to temperature change. One of them came from cultures growing below 65 degrees C, which was close to the optimal growth temperature, and another from cultures at or above 65 degrees C. These protein profiles were confirmed by Northern blots. On the basis of the proteomic and computational analyses, it was found that the thermophile proteins related to thermoadaptation might be involved in metabolic pathways as well as the stabilities and modifications of DNA and proteins. Interestingly, for the basic metabolism glycolysis, the phosphoglucomutase was up-regulated at below-optimum temperature, while the glyceraldehyde-3-phophate dehydrogenase was up-regulated at above-optimum temperature, suggesting that different regulations might be used for basic metabolism at different temperatures. To characterize the proteins in response to high temperatures, superoxide dismutase (SOD), an important enzyme in organism to remove free radical produced in stress environment such as high temperature, was selected as a target protein for this investigation. SOD was inactivated to construct a SOD mutant. The results showed that the SOD protein was essential in thermoadaptation of T. thermophilus. Our study, therefore, presented the thermophile proteins required for thermoadaptation and their possible pathways in thermoadaptation.
引用
收藏
页码:855 / 864
页数:10
相关论文
共 39 条
[1]  
ANKE H, 2004, NAT BIOTECHNOL, V22, P547
[2]   Visualizing membrane trafficking using total internal reflection fluorescence microscopy [J].
Beaumont, V .
BIOCHEMICAL SOCIETY TRANSACTIONS, 2003, 31 :819-823
[3]   Isochores and the evolutionary genomics of vertebrates [J].
Bernardi, G .
GENE, 2000, 241 (01) :3-17
[4]   Engineering a selectable marker for hyperthermophiles [J].
Brouns, SJJ ;
Wu, H ;
Akerboom, J ;
Turnbull, AP ;
de Vos, WM ;
van der Oost, J .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (12) :11422-11431
[5]   CHARACTERIZATION OF RIBONUCLEASE-P RNAS FROM THERMOPHILIC BACTERIA [J].
BROWN, JW ;
HAAS, ES ;
PACE, NR .
NUCLEIC ACIDS RESEARCH, 1993, 21 (03) :671-679
[6]   Comparative genomics of Thermus thermophilus:: Plasticity of the megaplasmid and its contribution to a thermophilic lifestyle [J].
Bruggemann, Holger ;
Chen, Chaoyin .
JOURNAL OF BIOTECHNOLOGY, 2006, 124 (04) :654-661
[7]   A METHOD TO ISOLATE RNA FROM GRAM-POSITIVE BACTERIA AND MYCOBACTERIA [J].
CHEUNG, AL ;
EBERHARDT, KJ ;
FISCHETTI, VA .
ANALYTICAL BIOCHEMISTRY, 1994, 222 (02) :511-514
[8]   Blast2GO:: a universal tool for annotation, visualization and analysis in functional genomics research [J].
Conesa, A ;
Götz, S ;
García-Gómez, JM ;
Terol, J ;
Talón, M ;
Robles, M .
BIOINFORMATICS, 2005, 21 (18) :3674-3676
[9]  
Conesa Ana, 2008, Int J Plant Genomics, V2008, P619832, DOI 10.1155/2008/619832
[10]  
CORNELIA S, 2006, FEBS J, V273, P4210