Complete mitochondrial genome sequence of Aequorea coerulescens

被引:1
|
作者
Lin, Jianing [1 ]
Feng, Song [2 ,3 ,4 ]
Wang, Lijuan [2 ,3 ,4 ]
机构
[1] Chinese Res Inst Environm Sci, Dept Riverine Ecol Conservat & Restorat, Beijing, Peoples R China
[2] Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao 266071, Shandong, Peoples R China
[3] Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Shandong, Peoples R China
[4] Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Shandong, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
基金
中国国家自然科学基金; 国家重点研发计划;
关键词
Aequorea coerulescens; giant jellyfish; hydromedusa; complete mitochondrial genome; Hydra spp; PHYLOGENETIC RELATIONSHIP; CNIDARIA SCYPHOZOA; JELLYFISH; HYDRA;
D O I
10.1080/23802359.2019.1660257
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete mitochondrial genome sequences of hydromedusa Aequorea coerulescens, a dominant giant jellyfish distributing in the Yellow Sea and northern East China Sea, China, is first reported in this research. Its mitochondrial DNA has 14,804 bp in length with a linear structure, containing 13 proteincoding genes (PCGs), 2rRNA (s- rRNA and l- rRNA), and 2tRNA (trnaW- TGA and tranM- AGT). The AthornT content of the whole base composition of the genome is 72.8% (A: 30.15%; C: 12.33%; G: 14.87%; T: 42.64%). ATG, ATA, and ATT are start codons in five (ATP8, ATP6, COX3, NAD6, NAD4l), four (NAD2, NAD5, NAD1, COX1) and two PCGs (NAD3, NAD4), respectively. COB and COX2 began with GTG and CAA as start codon, respectively. TAA and ATA were the stop codon of ATP6 and NAD5 as well as NAD2 and NAD4, respectively. However, other PCGs were terminated with different stop codons. The NJ phylogenetic tree among the related 15 jellyfish species showed that A. coerulescens is close to Hydra spp.
引用
收藏
页码:2882 / 2883
页数:2
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