Toward an Alzheimer's disease diagnosis via high-resolution blood gene expression

被引:63
作者
Fehlbaum-Beurdeley, Pascale [1 ]
Prado, Anne Charlotte Jarrige-Le [1 ]
Pallares, Diego [1 ]
Carriere, Jennifer [1 ]
Soucaille, Cyril [1 ]
Rouet, Fabien [1 ]
Drouin, Dominique [1 ]
Sol, Olivier [1 ]
Jordan, Heather [2 ]
Wu, Darong [2 ]
Lei, Ling [2 ]
Einstein, Richard [2 ]
Schweighoffer, Fabien [1 ]
Bracco, Laurent [1 ]
机构
[1] ExonHit Therapeut, Paris, France
[2] ExonHit Therapeut Inc, Gaithersburg, MD USA
关键词
Alzheimer's disease; Biomarkers; Gene expression; Microarray; Alternative splicing; Blood; AMYLOID PRECURSOR PROTEIN; PRE-MESSENGER-RNA; MONONUCLEAR-CELLS; SPLICE VARIANTS; GAMMA-SECRETASE; A-BETA; IDENTIFICATION; CHOLESTEROL; RECEPTORS; MICROARRAY;
D O I
10.1016/j.jalz.2009.07.001
中图分类号
R74 [神经病学与精神病学];
学科分类号
摘要
Background: There is a significant need for reliable molecular biomarkers to aid in Alzheimer's disease (AD) clinical diagnosis. Methods: We performed a genome-wide investigation of the human transcriptome, taking into account the discriminatory power of splice variations from the blood of 80 AD patients and 70 nondemented control (NDC) individuals. Results: We characterized a blood RNA signature composed of 170 oligonucleotide probe sets associated with 133 genes that can correctly distinguish AD patients from NDC with a sensitivity of 100% and specificity of 96%. Functionally, this signature highlights genes involved in pathways that were associated with macrophages and lymphocytes within AD patients: Transforming growth factor (TGF-beta) signaling, oxidative stress, innate immunity and inflammation, cholesterol homeostasis, and lipid-raft perturbation, whereas other genes may also provide new insights in the biology of AD. Conclusions: This study provides proof-of-concept that whole-blood profiling can generate an AD-associated classification signature via the specific relative expression of biologically relevant RNAs. Such a signature will need to be validated with extended patient cohorts, and evaluated to learn whether it can differentiate AD from others types of dementia. (C) 2010 The Alzheimer's Association. All rights reserved.
引用
收藏
页码:25 / 38
页数:14
相关论文
共 69 条
[1]  
Akira S, 2000, J ENDOTOXIN RES, V6, P383, DOI 10.1179/096805100101532315
[2]   Exonic expression profiling of breast cancer and benign lesions: a retrospective analysis [J].
Andre, Fabrice ;
Michiels, Stefan ;
Dessen, Philippe ;
Scott, Veronique ;
Suciu, Voichita ;
Uzan, Catherine ;
Lazar, Vladimir ;
Lacroix, Ludovic ;
Vassal, Gilles ;
Spielmann, Marc ;
Vielh, Philippe ;
Delaloge, Suzette .
LANCET ONCOLOGY, 2009, 10 (04) :381-390
[3]   SMIF, a Smad4-interacting protein that functions as a co-activator in TGFβ signalling [J].
Bai, RY ;
Koester, C ;
Ouyang, T ;
Hahn, SA ;
Hammerschmidt, M ;
Peschel, C ;
Duyster, J .
NATURE CELL BIOLOGY, 2002, 4 (03) :181-190
[4]   Biological markers in Alzheimer's disease [J].
Bailey, Peter .
CANADIAN JOURNAL OF NEUROLOGICAL SCIENCES, 2007, 34 :S72-S76
[5]   CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING [J].
BENJAMINI, Y ;
HOCHBERG, Y .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) :289-300
[6]   Molecular classification of Crohn's disease and ulcerative colitis patients using transcriptional profiles in peripheral blood mononuclear cells [J].
Burczynski, ME ;
Peterson, RL ;
Twine, NC ;
Zuberek, KA ;
Brodeur, BJ ;
Casciotti, L ;
Maganti, V ;
Reddy, PS ;
Strahs, A ;
Immermann, F ;
Spinelli, W ;
Schwertschlag, U ;
Slager, AM ;
Cotreau, MM ;
Dorner, AJ .
JOURNAL OF MOLECULAR DIAGNOSTICS, 2006, 8 (01) :51-61
[8]   Identification and characterization of an ataxin-1-interacting protein: A1Up, a ubiquitin-like nuclear protein [J].
Davidson, JD ;
Riley, B ;
Burright, EN ;
Duvick, LA ;
Zoghbi, HY ;
Orr, HT .
HUMAN MOLECULAR GENETICS, 2000, 9 (15) :2305-2312
[9]   RAC1 inhibition targets amyloid precursor protein processing by γ-secretase and decreases Aβ production in vitro and in vivo [J].
Désiré, L ;
Bourdin, J ;
Loiseau, N ;
Peillon, H ;
Picard, V ;
De Oliveira, C ;
Bachelot, F ;
Leblond, B ;
Taverne, T ;
Beausoleil, E ;
Lacombe, S ;
Drouin, D ;
Schweighoffer, F .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (45) :37516-37525
[10]  
DUBIEL W, 1992, J BIOL CHEM, V267, P22699