Self-organized pattern formation in motor-microtubule mixtures

被引:54
作者
Sankararaman, S
Menon, GI
Kumar, PBS
机构
[1] Inst Math Sci, Madras 600113, Tamil Nadu, India
[2] Indian Inst Technol, Dept Phys, Madras 600036, Tamil Nadu, India
关键词
D O I
10.1103/PhysRevE.70.031905
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
We model the stable self-organized patterns obtained in the nonequilibrium steady states of mixtures of molecular motors and microtubules. In experiments [Nedelec , Nature (London) 389, 305 (1997); Surrey , Science 292, 1167 (2001)] performed in a quasi-two-dimensional geometry, microtubules are oriented by complexes of motor proteins. This interaction yields a variety of patterns, including arrangements of asters, vortices, and disordered configurations. We model this system via a two-dimensional vector field describing the local coarse-grained microtubule orientation and two scalar density fields associated to molecular motors. These scalar fields describe motors which either attach to and move along microtubules or diffuse freely within the solvent. Transitions between single aster, spiral, and vortex states are obtained as a consequence of confinement, as parameters in our model are varied. For systems in which the effects of confinement can be neglected, we present a map of nonequilibrium steady states, which includes arrangements of asters and vortices separately as well as aster-vortex mixtures and fully disordered states. We calculate the steady state distribution of bound and free motors in aster and vortex configurations of microtubules and compare these to our simulation results, providing qualitative arguments for the stability of different patterns in various regimes of parameter space. We study the role of crowding or "saturation" effects on the density profiles of motors in asters, discussing the role of such effects in stabilizing single asters. We also comment on the implications of our results for experiments.
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页数:18
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共 24 条
  • [1] Universal properties of interacting Brownian motors
    Aghababaie, Y
    Menon, GI
    Plischke, M
    [J]. PHYSICAL REVIEW E, 1999, 59 (03): : 2578 - 2586
  • [2] Alberts B., 2002, Molecular Biology of The Cell, V4th
  • [3] Processive and nonprocessive models of kinesin movement
    Endow, SA
    Barker, DS
    [J]. ANNUAL REVIEW OF PHYSIOLOGY, 2003, 65 : 161 - 175
  • [4] From molecular to modular cell biology
    Hartwell, LH
    Hopfield, JJ
    Leibler, S
    Murray, AW
    [J]. NATURE, 1999, 402 (6761) : C47 - C52
  • [5] Spindle assembly in Xenopus egg extracts: Respective roles of centrosomes and microtubule self-organization
    Heald, R
    Tournebize, R
    Habermann, A
    Karsenti, E
    Hyman, A
    [J]. JOURNAL OF CELL BIOLOGY, 1997, 138 (03) : 615 - 628
  • [6] Self-organization of microtubules into bipolar spindles around artificial chromosomes in Xenopus egg extracts
    Heald, R
    Tournebize, R
    Blank, T
    Sandaltzopoulos, R
    Becker, P
    Hyman, A
    Karsenti, E
    [J]. NATURE, 1996, 382 (6590) : 420 - 425
  • [7] Kim J, 2003, J KOREAN PHYS SOC, V42, P162
  • [8] Actively contracting bundles of polar filaments
    Kruse, K
    Jülicher, F
    [J]. PHYSICAL REVIEW LETTERS, 2000, 85 (08) : 1778 - 1781
  • [9] Self-organization and mechanical properties of active filament bundles -: art. no. 051913
    Kruse, K
    Jülicher, F
    [J]. PHYSICAL REVIEW E, 2003, 67 (05) : 16
  • [10] Self-propagating patterns in active filament bundles -: art. no. 138101
    Kruse, K
    Camalet, S
    Jülicher, F
    [J]. PHYSICAL REVIEW LETTERS, 2001, 87 (13) : 138101 - 1