A cold-adapted esterase of a novel marine isolate, Pseudoalteromonas arctica: gene cloning, enzyme purification and characterization

被引:50
作者
Al Khudary, Rami [2 ]
Venkatachalam, Ramprasath [1 ,2 ]
Katzer, Moritz [1 ,2 ]
Elleuche, Skander [1 ,2 ]
Antranikian, Garabed [1 ,2 ]
机构
[1] Hamburg Univ Technol TUHH, Inst Tech Microbiol, D-21073 Hamburg, Germany
[2] Hamburg Univ Technol TUHH, Inst Tech Microbiol, D-21073 Hamburg, Germany
关键词
Esterase; Psychrophilic enzyme; Pseudoalteromonas arctica; OsmC; ALPHA/BETA-HYDROLASE FOLD; LIPOLYTIC ENZYME; HALOPLANKTIS TAC125; ACTIVE ESTERASE; STRAIN B11-1; EXPRESSION; LIPASE; PROTEINS; CLASSIFICATION; PSYCHROTROPH;
D O I
10.1007/s00792-010-0306-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A gene encoding an esterase (estO) was identified and sequenced from a gene library screen of the psychrotolerant bacterium Pseudoalteromonas arctica. Analysis of the 1,203 bp coding region revealed that the deduced peptide sequence is composed of 400 amino acids with a predicted molecular mass of 44.1 kDa. EstO contains a N-terminal esterase domain and an additional OsmC domain at the C-terminus (osmotically induced family of proteins). The highly conserved five-residue motif typical for all alpha/beta hydrolases (G x S x G) was detected from position 104 to 108 together with a putative catalytic triad consisting of Ser(106), Asp(196), and His(225). Sequence comparison showed that EstO exhibits 90% amino acid identity with hypothetical proteins containing similar esterase and OsmC domains but only around 10% identity to the amino acid sequences of known esterases. EstO variants with and without the OsmC domain were produced and purified as His-tag fusion proteins in E. coli. EstO displayed an optimum pH of 7.5 and optimum temperature of 25A degrees C with more than 50% retained activity at the freezing point of water. The thermostability of EstO (50% activity after 5 h at 40A degrees C) dramatically increased in the truncated variant (50% activity after 2.5 h at 90A degrees C). Furthermore, the esterase displays broad substrate specificity for esters of short-chain fatty acids (C-2-C-8).
引用
收藏
页码:273 / 285
页数:13
相关论文
共 58 条
  • [31] CLEAVAGE OF STRUCTURAL PROTEINS DURING ASSEMBLY OF HEAD OF BACTERIOPHAGE-T4
    LAEMMLI, UK
    [J]. NATURE, 1970, 227 (5259) : 680 - +
  • [32] Characterization and structural modeling of a new type of thermostable esterase from Thermotoga maritima
    Levisson, Mark
    van der Oost, John
    Kengen, Serve W. M.
    [J]. FEBS JOURNAL, 2007, 274 (11) : 2832 - 2842
  • [33] Carboxylic ester hydrolases from hyperthermophiles
    Levisson, Mark
    van der Oost, John
    Kengen, Serve W. M.
    [J]. EXTREMOPHILES, 2009, 13 (04) : 567 - 581
  • [34] Covalent reaction intermediate revealed in crystal structure of the Geobacillus stearothermophilus carboxylesterase Est30
    Liu, P
    Wang, YF
    Ewis, HE
    Abdelal, AT
    Lu, CD
    Harrison, RW
    Weber, IT
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2004, 342 (02) : 551 - 561
  • [35] Correlations between Shine-Dalgarno sequences and gene features such as predicted expression levels and operon structures
    Ma, J
    Campbell, A
    Karlin, S
    [J]. JOURNAL OF BACTERIOLOGY, 2002, 184 (20) : 5733 - 5745
  • [36] PROPERTIES OF COLD-ADAPTED MICROORGANISMS AND THEIR POTENTIAL ROLE IN BIOTECHNOLOGY
    MARGESIN, R
    SCHINNER, F
    [J]. JOURNAL OF BIOTECHNOLOGY, 1994, 33 (01) : 1 - 14
  • [37] Cold-adapted enzymes from marine antarctic microorganisms
    Marx, J-C.
    Collins, T.
    D'Amico, S.
    Feller, G.
    Gerday, C.
    [J]. MARINE BIOTECHNOLOGY, 2007, 9 (03) : 293 - 304
  • [38] The PSIPRED protein structure prediction server
    McGuffin, LJ
    Bryson, K
    Jones, DT
    [J]. BIOINFORMATICS, 2000, 16 (04) : 404 - 405
  • [39] Coping with cold:: The genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125
    Médigue, C
    Krin, E
    Pascal, G
    Barbe, V
    Bernsel, A
    Bertin, PN
    Cheung, F
    Cruveiller, S
    D'Amico, S
    Duilio, A
    Fang, G
    Feller, G
    Ho, C
    Mangenot, S
    Marino, G
    Nilsson, J
    Parrilli, E
    Rocha, EPC
    Rouy, Z
    Sekowska, A
    Tutino, ML
    Vallenet, D
    von Heijne, G
    Danchin, A
    [J]. GENOME RESEARCH, 2005, 15 (10) : 1325 - 1335
  • [40] Characterization of esterase activity in Geobacillus sp HBB-4
    Metin, Kubilay
    Ateslier, Z. Burcu Bakir
    Basbulbul, Gamze
    Biyik, H. Halil
    [J]. JOURNAL OF BASIC MICROBIOLOGY, 2006, 46 (05) : 400 - 409