Human biomarker interpretation: the importance of intra-class correlation coefficients (ICC) and their calculations based on mixed models, ANOVA, and variance estimates

被引:58
|
作者
Pleil, Joachim D. [1 ]
Wallace, M. Ariel Geer [1 ]
Stiegel, Matthew A. [2 ]
Funk, William E. [3 ]
机构
[1] US Environm Protect Agcy EPA, Off Res & Dev, Res Triangle Pk, NC USA
[2] Duke Univ, Med Ctr, Dept Occupat & Environm Safety, Durham, NC USA
[3] Northwestern Univ, Feinberg Sch Med, Chicago, IL 60611 USA
来源
JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH-PART B-CRITICAL REVIEWS | 2018年 / 21卷 / 03期
关键词
ENVIRONMENTAL EXPOSURE; BIOMONITORING DATA; OCCUPATIONAL HYGIENE; RISK-ASSESSMENT; HUMAN EXPOSOME; WITHIN-WORKER; HUMAN HEALTH; RELIABILITY; VARIABILITY; COMPONENTS;
D O I
10.1080/10937404.2018.1490128
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Human biomonitoring is the foundation of environmental toxicology, community public health evaluation, preclinical health effects assessments, pharmacological drug development and testing, and medical diagnostics. Within this framework, the intra-class correlation coefficient (ICC) serves as an important tool for gaining insight into human variability and responses and for developing risk-based assessments in the face of sparse or highly complex measurement data. The analytical procedures that provide data for clinical and public health efforts are continually evolving to expand our knowledge base of the many thousands of environmental and biomarker chemicals that define human systems biology. These chemicals range from the smallest molecules from energy metabolism (i.e., the metabolome), through larger molecules including enzymes, proteins, RNA, DNA, and adducts. In additiona, the human body contains exogenous environmental chemicals and contributions from the microbiome from gastrointestinal, pulmonary, urogenital, naso-pharyngeal, and skin sources. This complex mixture of biomarker chemicals from environmental, human, and microbiotic sources comprise the human exposome and generally accessed through sampling of blood, breath, and urine. One of the most difficult problems in biomarker assessment is assigning probative value to any given set of measurements as there are generally insufficient data to distinguish among sources of chemicals such as environmental, microbiotic, or human metabolism and also deciding which measurements are remarkable from those that are within normal human variability. The implementation of longitudinal (repeat) measurement strategies has provided new statistical approaches for interpreting such complexities, and use of descriptive statistics based upon intra-class correlation coefficients (ICC) has become a powerful tool in these efforts. This review has two parts; the first focuses on the history of repeat measures of human biomarkers starting with occupational toxicology of the early 1950s through modern applications in interpretation of the human exposome and metabolic adverse outcome pathways (AOPs). The second part reviews different methods for calculating the ICC and explores the strategies and applications in light of different data structures.
引用
收藏
页码:161 / 180
页数:20
相关论文
共 4 条
  • [1] Interval Estimation of the Intra-class Correlation in General Linear Mixed Effects Models
    Feng, Xiaoshu
    Mathew, Thomas
    Adragni, Kofi
    JOURNAL OF STATISTICAL THEORY AND PRACTICE, 2021, 15 (03)
  • [2] Interval Estimation of the Intra-class Correlation in General Linear Mixed Effects Models
    Xiaoshu Feng
    Thomas Mathew
    Kofi Adragni
    Journal of Statistical Theory and Practice, 2021, 15
  • [3] Estimating a graphical intra-class correlation coefficient (GICC) using multivariate probit-linear mixed models
    Yue, Chen
    Chen, Shaojie
    Sair, Hans I.
    Airan, Raag
    Caffo, Brian S.
    COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2015, 89 : 126 - 133
  • [4] The coefficient of determination R2 and intra-class correlation coefficient from generalized linear mixed-effects models revisited and expanded
    Nakagawa, Shinichi
    Johnson, Paul C. D.
    Schielzeth, Holger
    JOURNAL OF THE ROYAL SOCIETY INTERFACE, 2017, 14 (134)