Genotypic analysis of XRCC4 and susceptibility to cervical cancer

被引:15
作者
Gupta, M. K. [1 ]
Kushwah, A. S. [1 ,2 ]
Singh, R. [3 ]
Banerjee, M. [1 ]
机构
[1] Univ Lucknow, Dept Zool, Mol & Human Genet Lab, Lucknow 226007, Uttar Pradesh, India
[2] Banaras Hindu Univ, Inst Sci, Dept Zool, Varanasi, Uttar Pradesh, India
[3] King Georges Med Univ, Dept Obstet & Gynecol, Lucknow, Uttar Pradesh, India
关键词
Cervical cancer; disease susceptibility; DNA repair; genotyping; SNPs; XRCC4; SINGLE NUCLEOTIDE POLYMORPHISM; DNA-REPAIR GENES; STRAND BREAK REPAIR; SIGNIFICANT ASSOCIATION; PROTEIN XRCC4; LUNG-CANCER; DISEASE; RISK;
D O I
10.1080/09674845.2019.1637573
中图分类号
R446 [实验室诊断]; R-33 [实验医学、医学实验];
学科分类号
1001 ;
摘要
Background: XRCC4 encodes a DNA repair protein which maintains genome stability by repairing double-strand breaks by the error-prone method. Defects in the protein-encoding gene lead to impairment of DNA repair process and accumulation of DNA damage, a hallmark of cancer development. We hypothesised that variants in XRCC4 are linked to cervical cancer. Material and methods: Genotyping of XRCC4 variants viz. intron3 DIP (rs28360071), intron7 DIP (rs28360017), G-1394T(rs6869366) and G-652T (rs2075685) was carried out in 246 women with cervical cancer cases and 246 control women. Results: There were several links to cervical cancer: intron3 DIP (rs28360071) II genotype (p = 0.002) and I allele (odds ratio is 0.54-0.89) (p = 0.004), intron7 DIP (rs28360017) II genotype (p = 0.003) and I allele (odds ratio 0.68 [0.53-0.88]) (p = 0.004), and G-652T (rs2075685) genotype (p = 0.044) and the T allele (odds ratio 1.35 [1.03-1.77]) (p = 0.032). In combining data into haploviews, the DDGG allele combination had an odds ratio of 0.12 (0.04-0.39) (p= 0.029) and the IIGT combination an odds ratio of 3.08 (1.25-7.55) (p = 0.01) for cervical cancer. Conclusion: Our results suggested that homozygous 'I' and 'T' genotypes in certain XRCC4 sequences may be associated with the development of cervical cancer and so may be a useful biomarker to predict cervical cancer susceptibility
引用
收藏
页码:7 / 12
页数:6
相关论文
共 30 条
  • [21] Do polymorphisms in XRCC4 influence prostate cancer susceptibility in North Indian population?
    Mandal, Raju K.
    Singh, Vibha
    Kapoor, Rakesh
    Mittal, R. D.
    [J]. BIOMARKERS, 2011, 16 (03) : 236 - 242
  • [22] A SIMPLE SALTING OUT PROCEDURE FOR EXTRACTING DNA FROM HUMAN NUCLEATED CELLS
    MILLER, SA
    DYKES, DD
    POLESKY, HF
    [J]. NUCLEIC ACIDS RESEARCH, 1988, 16 (03) : 1215 - 1215
  • [23] Gene variants of XRCC4 and XRCC3 and their association with risk for urothelial bladder cancer
    Mittal, Rama Devi
    Gangwar, Ruchika
    Mandal, Raju K.
    Srivastava, Priyanka
    Ahirwar, Dinesh K.
    [J]. MOLECULAR BIOLOGY REPORTS, 2012, 39 (02) : 1667 - 1675
  • [24] The promise of global cervical-cancer prevention
    Schiffman, M
    Castle, PE
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2005, 353 (20) : 2101 - 2104
  • [25] Role of the functional variant (-652T>G) in the XRCC4 promoter in prostate cancer
    Shao, Ning
    Li, JiuMing
    Xu, Bin
    Wang, Yang
    Lu, XiaoJie
    Feng, NingHan
    [J]. MOLECULAR BIOLOGY REPORTS, 2014, 41 (11) : 7463 - 7470
  • [26] SHEsis, a powerful software platform for analyses of linkage disequilibrium, haplotype construction, and genetic association at polymorphism loci
    Shi, YY
    He, L
    [J]. CELL RESEARCH, 2005, 15 (02) : 97 - 98
  • [27] Polymorphisms of XRCC4 are involved in reduced colorectal cancer risk in Chinese schizophrenia patients
    Wang, Yang
    Wang, Lei
    Li, Xingwang
    Liu, Baocheng
    Zhao, Qingzhu
    Chen, Peng
    Wang, Ti
    Li, Tao
    Ji, Jue
    Yang, Fengping
    Wang, Quan
    Wang, Jinfen
    Xiao, Yanzeng
    Xu, Yifeng
    Feng, Guoyin
    Peng, Zhihai
    He, Lin
    He, Guang
    [J]. BMC CANCER, 2010, 10
  • [28] Wu KH, 2010, ANTICANCER RES, V30, P529
  • [29] An analysis of single nucleotide polymorphisms of 125 DNA repair genes in the Texas genome-wide association study of lung cancer with a replication for the XRCC4 SNPs
    Yu, Hongping
    Zhao, Hui
    Wang, Li-E
    Han, Younghun
    Chen, Wei V.
    Amos, Christopher I.
    Rafnar, Thorunn
    Sulem, Patrick
    Stefansson, Kari
    Landi, Maria Teresa
    Caporaso, Neil
    Albanes, Demetrius
    Thun, Michael
    McKay, James D.
    Brennan, Paul
    Wang, Yufei
    Houlston, Richard S.
    Spitz, Margaret R.
    Wei, Qingyi
    [J]. DNA REPAIR, 2011, 10 (04) : 398 - 407
  • [30] Association of Functional Polymorphisms of the XRCC4 Gene with the Risk of Breast Cancer: A Meta-analysis
    Zhou, Li-Ping
    Luan, Hong
    Dong, Xi-Hua
    Jin, Guo-Jiang
    Ma, Dong-Liang
    Shang, Hong
    [J]. ASIAN PACIFIC JOURNAL OF CANCER PREVENTION, 2012, 13 (07) : 3431 - 3436