Identification of a new operon involved in desulfurization of dibenzothiophenes using a metagenomic study and cloning and functional analysis of the genes

被引:10
作者
Abbasian, Firouz [1 ,2 ]
Lockington, Robin [3 ]
Megharaj, Mallavarapu [1 ,2 ]
Naidu, Ravi [1 ,2 ]
机构
[1] Univ Newcastle, Fac Sci & Informat Technol, GCER, Callaghan, NSW 2308, Australia
[2] Univ Newcastle, Cooperat Res Ctr Environm Risk Assessment & Remed, Callaghan, NSW 2308, Australia
[3] Univ S Australia, CERAR, Adelaide, SA 5001, Australia
关键词
Dibenzothiophenes; Cloning; Metagenomics; Desulfurization; STRAIN; BIODESULFURIZATION; DEGRADATION; ENZYMES; BIOMASS; WATER; OILS;
D O I
10.1016/j.enzmictec.2016.02.009
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The presence of sulphur-substituted hydrocarbons in fossil fuels are one of main reasons for the release of sulfur oxides into the environment. Dibenzothiophenes (DBT) are organic sulfur-containing molecules in crude oil, which have the potential for biological oxidation, with the sulphur being removed through an enzymatic cleavage of the C-S bonds. Therefore, finding new strains that can desulfurize this compound has recently become a point of interest. In this study, three new genes involved in the bacterial desulfurization of Dibenzothiophene, which were sequenced in the course of a metagenomic study, were isolated by PCR amplification in the laboratory. The activities of these genes were then analysed following insertion into an expression vector and cloning in Escherichia coli DH5 alpha cells. Based on the results, all three genes were actively expressed and their products could act on their corresponding substrates. (C) 2016 Elsevier Inc. All rights reserved.
引用
收藏
页码:24 / 28
页数:5
相关论文
共 28 条
  • [1] The integration of sequencing and bioinformatics in metagenomics
    Abbasian, Firouz
    Lockington, Robin
    Megharaj, Mallavarapu
    Naidu, Ravi
    [J]. REVIEWS IN ENVIRONMENTAL SCIENCE AND BIO-TECHNOLOGY, 2015, 14 (03) : 357 - 383
  • [2] A Comprehensive Review of Aliphatic Hydrocarbon Biodegradation by Bacteria
    Abbasian, Firouz
    Lockington, Robin
    Mallavarapu, Megharaj
    Naidu, Ravi
    [J]. APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 2015, 176 (03) : 670 - 699
  • [3] Exploring the Mechanism of Biocatalyst Inhibition in Microbial Desulfurization
    Abin-Fuentes, Andres
    Mohamed, Magdy El-Said
    Wang, Daniel I. C.
    Prathera, Kristala L. J.
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2013, 79 (24) : 7807 - 7817
  • [4] Phylogenetic characterization and novelty of organic sulphur metabolizing genes of Rhodococcus spp. (Eu-32)
    Akhtar, Nasrin
    Ghauri, Muhammad A.
    Anwar, Munir A.
    Heaphy, Shaun
    [J]. BIOTECHNOLOGY LETTERS, 2015, 37 (04) : 837 - 847
  • [5] Sequencing, cloning and expression of the dsz genes required for dibenzothiophene sulfone desulfurization from Gordonia alkanivorans strain 1B
    Alves, L.
    Melo, M.
    Mendonca, D.
    Simoes, F.
    Matos, J.
    Tenreiro, R.
    Girio, F. M.
    [J]. ENZYME AND MICROBIAL TECHNOLOGY, 2007, 40 (06) : 1598 - 1603
  • [6] Universal fluorescent labeling of amplification products using locked nucleic acids
    Asari, Masaru
    Oka, Kumiko
    Omura, Tomohiro
    Maseda, Chikatoshi
    Tasaki, Yoshikazu
    Shiono, Hiroshi
    Matsubara, Kazuo
    Matsuda, Mitsuyoshi
    Shimizu, Keiko
    [J]. ELECTROPHORESIS, 2013, 34 (03) : 448 - 455
  • [7] Desulfurization of dibenzothiophene (DBT) by a novel strain Lysinibacillus sphaericus DMT-7 isolated from diesel contaminated soil
    Bahuguna, Ashutosh
    Lily, Madhuri K.
    Munjal, Ashok
    Singh, Ravindra N.
    Dangwal, Koushalya
    [J]. JOURNAL OF ENVIRONMENTAL SCIENCES, 2011, 23 (06) : 975 - 982
  • [8] Thermophilic desulfurization of dibenzothiophene and different petroleum oils by Klebsiella sp 13T
    Bhatia, Sumedha
    Sharma, Durlubh K.
    [J]. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2012, 19 (08) : 3491 - 3497
  • [9] Deep-desulfurization of dibenzothiophene and its derivatives present in diesel oil by a newly isolated bacterium Achromobacter sp. to reduce the environmental pollution from fossil fuel combustion
    Bordoloi, Naba K.
    Rai, Sudhir K.
    Chaudhuri, Mihir K.
    Mukherjee, Ashis K.
    [J]. FUEL PROCESSING TECHNOLOGY, 2014, 119 : 236 - 244
  • [10] A novel Bacillus pumilus-related strain from tropical landfarm soil is capable of rapid dibenzothiophene degradation and biodesulfurization
    Buzanello, Elizandra Bruschi
    Rezende, Rachel Passos
    Oliveira Sousa, Fernanda Maria
    Silva Marques, Eric de Lima
    Loguercio, Leandro Lopes
    [J]. BMC MICROBIOLOGY, 2014, 14