Aspergillus Metabolome Database for Mass Spectrometry Metabolomics

被引：6

作者：

Gil-de-la-Fuente, Alberto ^{[1
,2
]}

Mamani-Huanca, Maricruz ^{[1
]}

Stroe, Maria C. ^{[3
]}

Saugar, Sergio ^{[2
]}

Garcia-Alvarez, Alejandra ^{[2
]}

Brakhage, Axel A. ^{[3
]}

Barbas, Coral ^{[1
]}

Otero, Abraham ^{[1
,2
]}

机构：

[1] CEU Univ, Univ San Pablo CEU, Ctr Metabol & Bioanal CEMBIO, Dept Chem & Biochem,Fac Farm, Madrid 28660, Spain

[2] CEU Univ, Univ San Pablo CEU, Escuela Politecn Super, Dept Informat Technol, Madrid 28660, Spain

[3] Friedrich Schiller Univ Jena, Inst Microbiol, Leibniz Inst Nat Prod Res & Infect Biol, Hans Knoll Inst HKI,Dept Mol & Appl Microbiol, D-07745 Jena, Germany

来源：

JOURNAL OF FUNGI | 2021年 / 7卷 / 05期

关键词：

Aspergillus; mass spectrometry; databases; metabolomics; annotation; identification; RESOURCE; SIGNALS; FUNGI; FEEDS; FOODS;

D O I：

10.3390/jof7050387

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

The Aspergillus Metabolome Database is a free online resource to perform metabolite annotation in mass spectrometry studies devoted to the genus Aspergillus. The database was created by retrieving and curating information on 2811 compounds present in 601 different species and subspecies of the genus Aspergillus. A total of 1514 scientific journals where these metabolites are mentioned were added as meta-information linked to their respective compounds in the database. A web service to query the database based on m/z (mass/charge ratio) searches was added to CEU Mass Mediator; these queries can be performed over the Aspergillus database only, or they can also include a user-selectable set of other general metabolomic databases. This functionality is offered via web applications and via RESTful services. Furthermore, the complete content of the database has been made available in .csv files and as a MySQL database to facilitate its integration into third-party tools. To the best of our knowledge, this is the first database and the first service specifically devoted to Aspergillus metabolite annotation based on m/z searches.

引用

页数：14