mustGAN: multi-stream Generative Adversarial Networks for MR Image Synthesis

被引:105
作者
Yurt, Mahmut [1 ,2 ]
Dar, Salman U. H. [1 ,2 ]
Erdem, Aykut [4 ]
Erdem, Erkut [5 ]
Oguz, Kader K. [2 ,6 ]
Cukur, Tolga [1 ,2 ,3 ]
机构
[1] Bilkent Univ, Dept Elect & Elect Engn, TR-06800 Ankara, Turkey
[2] Bilkent Univ, Natl Magnet Resonance Res Ctr, TR-06800 Ankara, Turkey
[3] Aysel Sabuncu Brain Res Ctr, Neurosci Program, TR-06800 Ankara, Turkey
[4] Koc Univ, Dept Comp Engn, TR-34450 Istanbul, Turkey
[5] Hacettepe Univ, Dept Comp Engn, TR-06800 Ankara, Turkey
[6] Hacettepe Univ, Dept Radiol, TR-06100 Ankara, Turkey
关键词
Magnetic resonance imaging (MRI); Multi-contrast; Generative adversarial networks (GAN); Image synthesis; Multi-stream; Fusion; SEGMENTATION; REGISTRATION;
D O I
10.1016/j.media.2020.101944
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Multi-contrast MRI protocols increase the level of morphological information available for diagnosis. Yet, the number and quality of contrasts are limited in practice by various factors including scan time and patient motion. Synthesis of missing or corrupted contrasts from other high-quality ones can alleviate this limitation. When a single target contrast is of interest, common approaches for multi-contrast MRI involve either one-to-one or many-to-one synthesis methods depending on their input. One-to-one methods take as input a single source contrast, and they learn a latent representation sensitive to unique features of the source. Meanwhile, many-to-one methods receive multiple distinct sources, and they learn a shared latent representation more sensitive to common features across sources. For enhanced image synthesis, we propose a multi-stream approach that aggregates information across multiple source images via a mixture of multiple one-to-one streams and a joint many-to-one stream. The complementary feature maps generated in the one-to-one streams and the shared feature maps generated in the many to-one stream are combined with a fusion block. The location of the fusion block is adaptively modified to maximize task-specific performance. Quantitative and radiological assessments on T-1,- T-2-, PD-weighted, and FLAIR images clearly demonstrate the superior performance of the proposed method compared to previous state-of-the-art one-to-one and many-to-one methods. (C) 2020 Elsevier B.V. All rights reserved.
引用
收藏
页数:13
相关论文
共 76 条
[1]  
Abramian D, 2019, I S BIOMED IMAGING, P1104, DOI [10.1109/ISBI.2019.8759515, 10.1109/isbi.2019.8759515]
[2]  
[Anonymous], 2014, arXiv
[3]   MedGAN: Medical image translation using GANs [J].
Armanious, Karim ;
Jiang, Chenming ;
Fischer, Marc ;
Kuestner, Thomas ;
Nikolaou, Konstantin ;
Gatidis, Sergios ;
Yang, Bin .
COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2020, 79
[4]  
Beers A., 2018, ARXIV PREPRINT ARXIV
[5]   Cross-modality synthesis from CT to PET using FCN and GAN networks for improved automated lesion detection [J].
Ben-Cohen, Avi ;
Klang, Eyal ;
Raskin, Stephen P. ;
Soffer, Shelly ;
Ben-Haim, Simona ;
Konen, Eli ;
Amitai, Michal Marianne ;
Greenspan, Hayit .
ENGINEERING APPLICATIONS OF ARTIFICIAL INTELLIGENCE, 2019, 78 :186-194
[6]   Learning Implicit Brain MRI Manifolds with Deep Learning [J].
Bermudez, Camilo ;
Plassard, Andrew J. ;
Davis, Larry T. ;
Newton, Allen T. ;
Resnick, Susan M. ;
Landman, Bennett A. .
MEDICAL IMAGING 2018: IMAGE PROCESSING, 2018, 10574
[7]   Synthesis of Positron Emission Tomography (PET) Images via Multi-channel Generative Adversarial Networks (GANs) [J].
Bi, Lei ;
Kim, Jinman ;
Kumar, Ashnil ;
Feng, Dagan ;
Fulham, Michael .
MOLECULAR IMAGING, RECONSTRUCTION AND ANALYSIS OF MOVING BODY ORGANS, AND STROKE IMAGING AND TREATMENT, 2017, 10555 :43-51
[8]   Pseudo-healthy Image Synthesis for White Matter Lesion Segmentation [J].
Bowles, Christopher ;
Qin, Chen ;
Ledig, Christian ;
Guerrero, Ricardo ;
Gunn, Roger ;
Hammers, Alexander ;
Sakka, Eleni ;
Dickie, David Alexander ;
Hernandez, Maria Valdes ;
Royle, Natalie ;
Wardlaw, Joanna ;
Rhodius-Meester, Hanneke ;
Tijms, Betty ;
Lemstra, Afina W. ;
van der Flier, Wiesje ;
Barkhof, Frederik ;
Scheltens, Philip ;
Rueckert, Daniel .
SIMULATION AND SYNTHESIS IN MEDICAL IMAGING, SASHIMI 2016, 2016, 9968 :87-96
[9]   Towards cross-modal organ translation and segmentation: A cycle and shape-consistent generative adversarial network [J].
Cai, Jinzheng ;
Zhang, Zizhao ;
Cui, Lei ;
Zheng, Yefeng ;
Yang, Lin .
MEDICAL IMAGE ANALYSIS, 2019, 52 :174-184
[10]   Biomedical Data Augmentation Using Generative Adversarial Neural Networks [J].
Calimeri, Francesco ;
Marzullo, Aldo ;
Stamile, Claudio ;
Terracina, Giorgio .
ARTIFICIAL NEURAL NETWORKS AND MACHINE LEARNING, PT II, 2017, 10614 :626-634