Long-range temporal coordination of gene expression in synthetic microbial consortia

被引:44
作者
Kim, Jae Kyoung [1 ]
Chen, Ye [2 ,6 ]
Hirning, Andrew J. [2 ]
Alnahhas, Razan N. [2 ]
Josic, Kresimir [2 ,3 ,4 ]
Bennett, Matthew R. [2 ,5 ]
机构
[1] Korea Adv Inst Sci & Technol, Dept Math, Daejeon, South Korea
[2] Rice Univ, Dept Biosci, Houston, TX 77005 USA
[3] Univ Houston, Dept Math, Houston, TX 77204 USA
[4] Univ Houston, Dept Biol & Biochem, Houston, TX 77004 USA
[5] Rice Univ, Dept Bioengn, Houston, TX 77251 USA
[6] MIT, Dept Bioengn, Boston, MA USA
基金
新加坡国家研究基金会; 美国国家卫生研究院;
关键词
TOGGLE SWITCH; TRIGGER WAVES; NETWORK; QUORUM; SYNCHRONIZATION; COMMUNICATION; OSCILLATIONS; TIME;
D O I
10.1038/s41589-019-0372-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Synthetic microbial consortia have an advantage over isogenic synthetic microbes because they can apportion biochemical and regulatory tasks among the strains. However, it is difficult to coordinate gene expression in spatially extended consortia because the range of signaling molecules is limited by diffusion. Here, we show that spatio-temporal coordination of gene expression can be achieved even when the spatial extent of the consortium is much greater than the diffusion distance of the signaling molecules. To do this, we examined the dynamics of a two-strain synthetic microbial consortium that generates coherent oscillations in small colonies. In large colonies, we find that temporally coordinated oscillations across the population depend on the presence of an intrinsic positive feedback loop that amplifies and propagates intercellular signals. These results demonstrate that synthetic multicellular systems can be engineered to exhibit coordinated gene expression using only transient, short-range coupling among constituent cells.
引用
收藏
页码:1102 / +
页数:10
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