A study of the tautomeric equilibria of 2-hydroxypyridine/2-oxopyridine and of cytosine in water using the coupled reference interaction site model(RISM)/molecular dynamics (MD) approach

被引:16
|
作者
Freedman, H [1 ]
Nguyen, HN [1 ]
Truong, TN [1 ]
机构
[1] Univ Utah, Dept Chem, Henry Eyring Ctr Theoret Chem, Salt Lake City, UT 84112 USA
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2004年 / 108卷 / 49期
关键词
D O I
10.1021/jp046453y
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present an application of the recently proposed coupled reference interation site model (RISM)/molecular dynamics (MD) solvation free-energy method (Freedman, H.; Truong, T. N. Chem. Phys. Lett. 2003, 381, 362; J. Chem. Phys. 2004, 121, 2187) to study the hydration effect upon the tautomeric equilibria of 2-hydroxypyridine and 2-oxopyridine and of cytosine in water. In this methodology, simulation trajectories of solvated systems are computed and averaged to determine radial distribution functions, which are then inserted into a RISM expression for the solvation free energy. The computed differences in free energy of hydration for the two tautomerizations agree well with the experimental data as well as results from previous free-energy simulations. This is particularly encouraging since the coupled RISM/MD method requires a single MD simulation as compared to the more complicated and computationally demanding free-energy simulation methods.
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页码:19043 / 19048
页数:6
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