Identification of Potential Insect Growth Inhibitor against Aedes aegypti: A Bioinformatics Approach

被引:6
作者
Da Costa, Glauber, V [1 ,2 ,3 ]
Neto, Moyses F. A. [4 ]
Da Silva, Alicia K. P. [3 ]
De Sa, Ester M. F. [3 ]
Cancela, Luanne C. F. [3 ]
Vega, Jeanina S. [3 ]
Lobato, Cassio M. [2 ,3 ]
Zuliani, Juliana P. [5 ]
Espejo-Roman, Jose M. [6 ]
Campos, Joaquin M. [6 ]
Leite, Franco H. A. [4 ]
Santos, Cleydson B. R. [1 ,2 ,6 ]
机构
[1] Univ Fed Amapa, Grad Program Network Pharmaceut Innovat, BR-68902280 Macapa, AP, Brazil
[2] Univ Fed Amapa, Dept Biol & Hlth Sci, Lab Modeling & Computat Chem, BR-68902280 Macapa, AP, Brazil
[3] Univ Fed Amapa, Dept Biol & Hlth Sci, Lab Biotechnol Nat Prod, BR-68902280 Macapa, AP, Brazil
[4] State Univ Feira de Santana, Lab Mol Modeling, BR-44036900 Feira De Santana, BA, Brazil
[5] Fundacao Oswaldo Cruz, FIOCRUZ Rondonia, Lab Cellular Immunol Appl Hlth, BR-78912000 Porto Velho, RO, Brazil
[6] Univ Granada, Fac Pharm, Inst Biosanit Res Ibs, Dept Pharmaceut & Organ Chem, E-18071 Granada, Spain
关键词
Aedes aegypti; pharmacophore; molecular docking; insect growth inhibitor; CHITIN SYNTHESIS; P-GLYCOPROTEIN; POLYSACCHARIDE DEACETYLASE; ABC TRANSPORTERS; ACID-DERIVATIVES; SWISS-MODEL; BINDING; PREDICTION; MECHANISM; DOCKING;
D O I
10.3390/ijms23158218
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Aedes aegypti is the main vector that transmits viral diseases such as dengue, hemorrhagic dengue, urban yellow fever, zika, and chikungunya. Worldwide, many cases of dengue have been reported in recent years, showing significant growth. The best way to manage diseases transmitted by Aedes aegypti is to control the vector with insecticides, which have already been shown to be toxic to humans; moreover, insects have developed resistance. Thus, the development of new insecticides is considered an emergency. One way to achieve this goal is to apply computational methods based on ligands and target information. In this study, sixteen compounds with acceptable insecticidal activities, with 100% larvicidal activity at low concentrations (2.0 to 0.001 mg center dot L-1), were selected from the literature. These compounds were used to build up and validate pharmacophore models. Pharmacophore model 6 (AUC = 0.78; BEDROC = 0.6) was used to filter 4793 compounds from the subset of lead-like compounds from the ZINC database; 4142 compounds (dG < 0 kcal/mol) were then aligned to the active site of the juvenile hormone receptor Aedes aegypti (PDB: 5V13), 2240 compounds (LE < -0.40 kcal/mol) were prioritized for molecular docking from the construction of a chitin deacetylase model of Aedes aegypti by the homology modeling of the Bombyx mori species (PDB: 5ZNT), which aligned 1959 compounds (dG < 0 kcal/mol), and 20 compounds (LE < -0.4 kcal/mol) were predicted for pharmacokinetic and toxicological prediction in silico (Preadmet, SwissADMET, and eMolTox programs). Finally, the theoretical routes of compounds M01, M02, M03, M04, and M05 were proposed. Compounds M01-M05 were selected, showing significant differences in pharmacokinetic and toxicological parameters in relation to positive controls and interaction with catalytic residues among key protein sites reported in the literature. For this reason, the molecules investigated here are dual inhibitors of the enzymes chitin synthase and juvenile hormonal protein from insects and humans, characterizing them as potential insecticides against the Aedes aegypti mosquito.
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页数:30
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共 180 条
[1]  
Abaukaka Yahaya Abdulwahid, 2020, Environ Anal Health Toxicol, V35, pe2020016, DOI 10.5620/eaht.2020016
[2]   Downregulation of Organic Anion Transporting Polypeptide (OATP) 1B1 Transport Function by Lysosomotropic Drug Chloroquine: Implication in OATP-Mediated Drug-Drug Interactions [J].
Alam, Khondoker ;
Pahwa, Sonia ;
Wang, Xueying ;
Zhang, Pengyue ;
Ding, Kai ;
Abuznait, Alaa H. ;
Li, Lang ;
Yue, Wei .
MOLECULAR PHARMACEUTICS, 2016, 13 (03) :839-851
[3]   Revisiting the General Solubility Equation: In Silico Prediction of Aqueous Solubility Incorporating the Effect of Topographical Polar Surface Area [J].
Ali, Jogoth ;
Camilleri, Patrick ;
Brown, Marc B. ;
Hutt, Andrew J. ;
Kirton, Stewart B. .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2012, 52 (02) :420-428
[4]   Insect cuticular sclerotization: A review [J].
Andersen, Svend Olav .
INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY, 2010, 40 (03) :166-178
[5]   An integrated approach towards the discovery of novel non-nucleoside Leishmania major pteridine reductase 1 inhibitors [J].
Andrade Leite, Franco Henrique ;
Froes, Thamires Quadros ;
da Silva, Suellen Goncalves ;
Macedo de Souza, Evandro Italo ;
Vital-Fujii, Drielli Gomes ;
Goulart Trossini, Gustavo Henrique ;
da Rocha Pita, Samuel Silva ;
Castilho, Marcelo Santos .
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2017, 132 :322-332
[6]   Structural Basis of Chitin Oligosaccharide Deacetylation [J].
Andres, Eduardo ;
Albesa-Jove, David ;
Biarnes, Xevi ;
Moerschbacher, Bruno M. ;
Guerin, Marcelo E. ;
Planas, Antoni .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2014, 53 (27) :6882-6887
[7]   Prediction Is a Balancing Act: Importance of Sampling Methods to Balance Sensitivity and Specificity o Predictive Models Based on Imbalanced Chemical Data Sets [J].
Banerjee, Priyanka ;
Dehnbostel, Frederic O. ;
Preissner, Robert .
FRONTIERS IN CHEMISTRY, 2018, 6
[8]   Investigation of the scavenging mechanism of tyrosyl radical by hydroxybenzohydroxamic acid derivatives: A DFT study [J].
Bayat, Ahmad ;
Fattahi, Alireza .
COMPUTATIONAL AND THEORETICAL CHEMISTRY, 2013, 1018 :35-44
[9]   Toward the estimation of the absolute quality of individual protein structure models [J].
Benkert, Pascal ;
Biasini, Marco ;
Schwede, Torsten .
BIOINFORMATICS, 2011, 27 (03) :343-350
[10]   ACTIVE CONTROL OF THE MECHANICAL PROPERTIES OF INSECT ENDOCUTICLE [J].
BENNETCLARK, HC .
JOURNAL OF INSECT PHYSIOLOGY, 1962, 8 (06) :627-633