Transfer learning from RF to B-mode temporal enhanced ultrasound features for prostate cancer detection

被引:28
作者
Azizi, Shekoofeh [1 ]
Mousavi, Parvin [2 ]
Yan, Pingkun [3 ]
Tahmasebi, Amir [3 ]
Kwak, Jin Tae [4 ]
Xu, Sheng [5 ]
Turkbey, Baris [5 ]
Choyke, Peter [5 ]
Pinto, Peter [5 ]
Wood, Bradford [5 ]
Abolmaesumi, Purang [1 ]
机构
[1] Univ British Columbia, Vancouver, BC, Canada
[2] Queens Univ, Kingston, ON, Canada
[3] Philips Res North Amer, Cambridge, MA USA
[4] Sejong Univ, Gwangjin Gu, SU, South Korea
[5] NIH, Bldg 10, Bethesda, MD 20892 USA
基金
加拿大自然科学与工程研究理事会; 加拿大健康研究院;
关键词
Temporal enhanced ultrasound; Radiofrequency signal; B-mode; Deep learning; Deep belief network; Transfer learning; Cancer diagnosis; Prostate cancer; SEGMENTATION; BIOPSY;
D O I
10.1007/s11548-017-1573-x
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Purpose We present a method for prostate cancer (PCa) detection using temporal enhanced ultrasound (TeUS) data obtained either from radiofrequency (RF) ultrasound signals or B-mode images. Methods For the first time, we demonstrate that by applying domain adaptation and transfer learning methods, a tissue classification model trained on TeUS RF data (source domain) can be deployed for classification using TeUS B-mode data alone (target domain), where both data are obtained on the same ultrasound scanner. This is a critical step for clinical translation of tissue classification techniques that primarily rely on accessing RF data, since this imaging modality is not readily available on all commercial scanners in clinics. Proof of concept is provided for in vivo characterization of PCa using TeUS B-mode data, where different nonlinear processing filters in the pipeline of the RF to Bmode conversion result in a distribution shift between the two domains. Results Our in vivo study includes data obtained in MRIguided targeted procedure for prostate biopsy. We achieve comparable area under the curve using TeUS RF and B-mode data for medium to large cancer tumor sizes in biopsy cores (>4 mm). Conclusion Our result suggests that the proposed adaptation technique is successful in reducing the divergence between TeUS RF and B-mode data.
引用
收藏
页码:1111 / 1121
页数:11
相关论文
共 30 条
[1]  
[Anonymous], 2012, UNSUPERVISED TRANSF
[2]  
[Anonymous], SPIE MED IMAGING
[3]  
[Anonymous], IEEE T MED IMAGING, DOI DOI 10.1109/TPEL.2016.2540651
[4]  
[Anonymous], INT J COMPUT ASSIST
[5]  
[Anonymous], 2015, INT JOINT C ART INT
[6]  
Azizi Shekoofeh, 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016. 19th International Conference. Proceedings: LNCS 9900, P653, DOI 10.1007/978-3-319-46720-7_76
[7]   Ultrasound-Based Detection of Prostate Cancer Using Automatic Feature Selection with Deep Belief Networks [J].
Azizi, Shekoofeh ;
Imani, Farhad ;
Zhuang, Bo ;
Tahmasebi, Amir ;
Kwak, Jin Tae ;
Xu, Sheng ;
Uniyal, Nishant ;
Turkbey, Baris ;
Choyke, Peter ;
Pinto, Peter ;
Wood, Bradford ;
Moradi, Mehdi ;
Mousavi, Parvin ;
Abolmaesumi, Purang .
MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2015, PT II, 2015, 9350 :70-77
[8]   Supervised domain adaptation of decision forests: Transfer of models trained in vitro for in vivo intravascular ultrasound tissue characterization [J].
Conjeti, Sailesh ;
Katouzian, Amin ;
Roy, Abhijit Guha ;
Peter, Loic ;
Sheet, Debdoot ;
Carlier, Stephane ;
Laine, Andrew ;
Navab, Nassir .
MEDICAL IMAGE ANALYSIS, 2016, 32 :1-17
[9]   Tissue Classification Using Ultrasound-Induced Variations in Acoustic Backscattering Features [J].
Daoud, Mohammad I. ;
Mousavi, Parvin ;
Imani, Farhad ;
Rohling, Robert ;
Abolmaesumi, Purang .
IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2013, 60 (02) :310-320
[10]   Upgrading and Downgrading of Prostate Cancer from Biopsy to Radical Prostatectomy: Incidence and Predictive Factors Using the Modified Gleason Grading System and Factoring in Tertiary Grades [J].
Epstein, Jonathan I. ;
Feng, Zhaoyong ;
Trock, Bruce J. ;
Pierorazio, Phillip M. .
EUROPEAN UROLOGY, 2012, 61 (05) :1019-1024