Sequence databases and homology searching using World Wide Web

被引:0
作者
Paterson, M
机构
[1] Department of Medicine, St. Mary's Hospital Medical School, Imperial College, London, W2 1PG, Norfolk Place
来源
MOLECULAR MEDICINE TODAY | 1996年 / 2卷 / 03期
关键词
D O I
10.1016/1357-4310(96)88718-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
RNA, DNA and protein sequence data produced in laboratories around the world may be freely accessed by other scientists using the Internet, Originally, these sequence databases were compiled from published literature, but now researchers may deposit sequence data directly, using the World Wide Web, Almost 50 000 protein sequences and over 600 000 nucleotide sequences are available, forming a significant scientific resource, By comparing novel sequence data with sequence entries and structural data showing significant homology, it is possible to predict the function and three-dimensional structure of novel proteins.
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页码:98 / 102
页数:5
相关论文
共 9 条
  • [1] ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
  • [2] BAIROCH A, 1994, NUCLEIC ACIDS RES, V22, P3583
  • [3] PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES
    BERNSTEIN, FC
    KOETZLE, TF
    WILLIAMS, GJB
    MEYER, EF
    BRICE, MD
    RODGERS, JR
    KENNARD, O
    SHIMANOUCHI, T
    TASUMI, M
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) : 535 - 542
  • [4] PROTEIN-STRUCTURE COMPARISON BY ALIGNMENT OF DISTANCE MATRICES
    HOLM, L
    SANDER, C
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1993, 233 (01) : 123 - 138
  • [5] HOLM L, 1994, NUCLEIC ACIDS RES, V22, P3600
  • [6] MURZIN AG, 1995, J MOL BIOL, V247, P536, DOI 10.1016/S0022-2836(05)80134-2
  • [7] IMPROVED TOOLS FOR BIOLOGICAL SEQUENCE COMPARISON
    PEARSON, WR
    LIPMAN, DJ
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1988, 85 (08) : 2444 - 2448
  • [8] DATABASE OF HOMOLOGY-DERIVED PROTEIN STRUCTURES AND THE STRUCTURAL MEANING OF SEQUENCE ALIGNMENT
    SANDER, C
    SCHNEIDER, R
    [J]. PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1991, 9 (01): : 56 - 68
  • [9] SONNHAMMER ELL, 1994, PROTEIN SCI, V3, P482