Global analysis of the apple fruit microbiome: are all apples the same?

被引：77

作者：

Abdelfattah, Ahmed ^{[1
,2
]}

Freilich, Shiri ^{[3
]}

Bartuv, Rotem ^{[3
,4
,5
]}

Zhimo, V. Yeka ^{[4
]}

Kumar, Ajay ^{[4
]}

Biasi, Antonio ^{[4
]}

Salim, Shoshana ^{[4
]}

Feygenberg, Oleg ^{[4
]}

Burchard, Erik ^{[6
]}

Dardick, Christopher ^{[6
]}

Liu, Jia ^{[7
]}

Khan, Awais ^{[8
]}

Ellouze, Walid ^{[9
]}

Ali, Shawkat ^{[10
]}

Spadaro, Davide ^{[11
]}

Torres, Rosario ^{[12
]}

Teixido, Neus ^{[12
]}

Ozkaya, Okan ^{[13
]}

Buehlmann, Andreas ^{[14
]}

Vero, Silvana ^{[15
]}

Mondino, Pedro ^{[16
]}

Berg, Gabriele ^{[1
]}

Wisniewski, Michael ^{[17
]}

Droby, Samir ^{[4
]}

机构：

[1] Graz Univ Technol, Inst Environm Biotechnol, Petersgasse 12, A-8010 Graz, Austria

[2] Stockholm Univ, Dept Ecol Environm & Plant Sci, Stockholm, Sweden

[3] Newe Yaar Res Ctr, Agr Res Org, Inst Plant Sci, Dept Nat Resources, POB 1021, Ramat Yishay, Israel

[4] Agr Res Org, Dept Postharvest Sci, Volcani Inst, POB 15159, IL-7505101 Rishon Leziyyon, Israel

[5] Hebrew Univ Jerusalem, Fac Agr, Robert H Smith Inst Plant Sci & Genet Agr, Rehovot, Israel

[6] USDA ARS, Appalachian Fruit Res Stn, Kearneysville, WV 25430 USA

[7] Chongqing Univ Arts & Sci, Coll Landscape Architecture & Life Sci, Chongqing Key Lab Econ Plant Biotechnol, Chongqing 402160, Peoples R China

[8] Cornell Univ, Barton Lab 112, 5 Castle Creek Dr, Geneva, NY 14456 USA

[9] Agr & Agri Food Canada, Vineland Stn, ON, Canada

[10] Agr & Agri Food Canada, 32 Main St, Kentville, NS B4N 1J5, Canada

[11] Univ Torino, AGROINNOVA Ctr Competence, Dept Agr Forestry & Food Sci DISAFA, Largo Braccini 2, I-10095 Grugliasco, Italy

[12] IRTA, Parc Cient & Tecnol Gardeny, Fruitcentre Bldg, Lleida 25003, Catalonia, Spain

[13] Cukurova Univ, Fac Agr 1330, Dept Hort, Adana, Turkey

[14] Competence Div Plants & Plant Prod, Agroscope, Muller Thurgaustr 29, CH-8820 Wadenswil, Switzerland

[15] Fac Quim Montevideo, UdeLaR Catedra Microbiol, Montevideo, Uruguay

[16] Univ Republica, Fac Agron, Dept Plant Protect, Garzon 780, Montevideo 12900, Uruguay

[17] Virginia Polytech Inst & State Univ, Dept Biol Sci, 220 Ag Quad Ln, Blacksburg, VA 24061 USA

来源：

ENVIRONMENTAL MICROBIOLOGY | 2021年 / 23卷 / 10期

关键词：

POSTHARVEST BIOCONTROL; DISEASE-CONTROL; SYLVESTRIS L; BLUE MOLD; INSIGHTS; COMMUNITIES; DIVERSITY; DATABASE;

D O I：

10.1111/1462-2920.15469

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

We present the first worldwide study on the apple (Malus x domestica) fruit microbiome that examines questions regarding the composition and the assembly of microbial communities on and in apple fruit. Results revealed that the composition and structure of the fungal and bacterial communities associated with apple fruit vary and are highly dependent on geographical location. The study also confirmed that the spatial variation in the fungal and bacterial composition of different fruit tissues exists at a global level. Fungal diversity varied significantly in fruit harvested in different geographical locations and suggests a potential link between location and the type and rate of postharvest diseases that develop in each country. The global core microbiome of apple fruit was represented by several beneficial microbial taxa and accounted for a large fraction of the fruit microbial community. The study provides foundational information about the apple fruit microbiome that can be utilized for the development of novel approaches for the management of fruit quality and safety, as well as for reducing losses due to the establishment and proliferation of postharvest pathogens. It also lays the groundwork for studying the complex microbial interactions that occur on apple fruit surfaces.

引用

页码：6038 / 6055

页数：18

共 67 条

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