POLE and POLD1 mutations in 529 kindred with familial colorectal cancer and/or polyposis: review of reported cases and recommendations for genetic testing and surveillance

被引:193
作者
Bellido, Fernando [1 ]
Pineda, Marta [1 ]
Aiza, Gemma [1 ]
Valdes-Mas, Rafael [2 ]
Navarro, Matilde [1 ]
Puente, Diana A. [2 ]
Pons, Tirso [3 ,4 ]
Gonzalez, Sara [1 ]
Iglesias, Silvia [1 ]
Darder, Esther [5 ]
Pinol, Virginia [6 ,7 ]
Luis Soto, Jose [8 ]
Valencia, Alfonso [3 ,4 ]
Blanco, Ignacio [1 ]
Urioste, Miguel [9 ,10 ]
Brunet, Joan [5 ,7 ]
Lazaro, Conxi [1 ]
Capella, Gabriel [1 ]
Puente, Xose S. [2 ]
Valle, Laura [1 ]
机构
[1] IDIBELL, Catalan Inst Oncol, Hereditary Canc Program, Lhospitalet De Llobregat, Spain
[2] Univ Oviedo, Dept Bioquim & Biol Mol, Inst Univ Oncol Principado Asturias, Oviedo, Spain
[3] Spanish Natl Canc Res Ctr CNIO, Struct Biol Program, Madrid, Spain
[4] Spanish Natl Canc Res Ctr CNIO, Biocomp Program, Madrid, Spain
[5] IDIBGi, Hereditary Canc Program, Catalan Inst Oncol, Girona, Spain
[6] Hosp Dr Josep Trueta, Dept Gastroenterol, Girona, Spain
[7] Univ Girona, Sch Med, Dept Med Sci, Girona, Spain
[8] Elche Univ Hosp, Mol Genet Lab, Elche, Spain
[9] Spanish Natl Canc Res Ctr CNIO, Human Canc Genet Program, Familial Canc Clin Unit, Madrid, Spain
[10] Ctr Biomed Network Res Rare Dis CIBERER, Madrid, Spain
关键词
adenomatous polyposis; genetic testing; hereditary nonpolyposis colorectal cancer; polymerase proofreading-associated polyposis; DNA-POLYMERASE DELTA; GERMLINE MUTATIONS; PRACTICE GUIDELINE; CARCINOMAS; ADENOMAS; SOCIETY; MUTATOR; SNVS;
D O I
10.1038/gim.2015.75
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Purpose: Germ-line mutations in the exonuclease domains of POLE and POLD1 have been recently associated with polyposis and colorectal cancer (CRC) predisposition. Here, we aimed to gain a better understanding of the phenotypic characteristics of this syndrome to establish specific criteria for POLE and POLD1 mutation screening and to help define the clinical management of mutation carriers. Methods: The exonuclease domains of POLE and POLD1 were studied in 529 kindred, 441 with familial nonpolyposis CRC and 88 with polyposis, by using pooled DNA amplification and massively parallel sequencing. Results: Seven novel or rare genetic variants were identified. In addition to the POLE p.L424V recurrent mutation in a patient with polyposis, CRC and oligodendroglioma, six novel or rare POLD1 variants (four of them, p.D316H, p.D316G, p.R409W, and p.L474P, with strong evidence for pathogenicity) were identified in nonpolyposis CRC families. Phenotypic data from these and previously reported POLE/POLD1 carriers point to an associated phenotype characterized by attenuated or oligo-adenomatous colorectal polyposis, CRC, and probably brain tumors. In addition, POLD1 mutations predispose to endometrial and breast tumors. Conclusion: Our results widen the phenotypic spectrum of the POLE/POLD1-associated syndrome and identify novel pathogenic variants. We propose guidelines for genetic testing and surveillance recommendations.
引用
收藏
页码:325 / 332
页数:8
相关论文
共 18 条
[1]   A method and server for predicting damaging missense mutations [J].
Adzhubei, Ivan A. ;
Schmidt, Steffen ;
Peshkin, Leonid ;
Ramensky, Vasily E. ;
Gerasimova, Anna ;
Bork, Peer ;
Kondrashov, Alexey S. ;
Sunyaev, Shamil R. .
NATURE METHODS, 2010, 7 (04) :248-249
[2]   DNA polymerase ε and δ proofreading suppress discrete mutator and cancer phenotypes in mice [J].
Albertson, Tina M. ;
Ogawa, Masanori ;
Bugni, James M. ;
Hays, Laura E. ;
Chen, Yang ;
Wang, Yanping ;
Treuting, Piper M. ;
Heddle, John A. ;
Goldsby, Robert E. ;
Preston, Bradley D. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (40) :17101-17104
[3]  
Elsayed FA, EUR J HUM GENET
[4]   Improving the Assessment of the Outcome of Nonsynonymous SNVs with a Consensus Deleteriousness Score, Condel [J].
Gonzalez-Perez, Abel ;
Lopez-Bigas, Nuria .
AMERICAN JOURNAL OF HUMAN GENETICS, 2011, 88 (04) :440-449
[5]   A practice guideline from the American College of Medical Genetics and Genomics and the National Society of Genetic Counselors: referral indications for cancer predisposition assessment [J].
Hampel, Heather ;
Bennett, Robin L. ;
Buchanan, Adam ;
Pearlman, Rachel ;
Wiesner, Georgia L. .
GENETICS IN MEDICINE, 2015, 17 (01) :70-87
[6]   Increased rates of genomic deletions generated by mutations in the yeast gene encoding DNA polymerase δ or by decreases in the cellular levels of DNA polymerase δ [J].
Kokoska, RJ ;
Stefanovic, L ;
DeMai, J ;
Petes, TD .
MOLECULAR AND CELLULAR BIOLOGY, 2000, 20 (20) :7490-7504
[7]   Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm [J].
Kumar, Prateek ;
Henikoff, Steven ;
Ng, Pauline C. .
NATURE PROTOCOLS, 2009, 4 (07) :1073-1082
[8]   dbNSFP v2.0: A Database of Human Non-synonymous SNVs and Their Functional Predictions and Annotations [J].
Liu, Xiaoming ;
Jian, Xueqiu ;
Boerwinkle, Eric .
HUMAN MUTATION, 2013, 34 (09) :E2393-E2402
[9]   A method to select for mutator DNA polymerase δs in Saccharomyces cerevisiae [J].
Murphy, Kelly ;
Darmawan, Hariyanto ;
Schultz, Amy ;
da Silva, Elizabeth Fidalgo ;
Reha-Krantz, Linda J. .
GENOME, 2006, 49 (04) :403-410
[10]   Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas [J].
Palles, Claire ;
Cazier, Jean-Baptiste ;
Howarth, Kimberley M. ;
Domingo, Enric ;
Jones, Angela M. ;
Broderick, Peter ;
Kemp, Zoe ;
Spain, Sarah L. ;
Almeida, Estrella Guarino ;
Salguero, Israel ;
Sherborne, Amy ;
Chubb, Daniel ;
Carvajal-Carmona, Luis G. ;
Ma, Yusanne ;
Kaur, Kulvinder ;
Dobbins, Sara ;
Barclay, Ella ;
Gorman, Maggie ;
Martin, Lynn ;
Kovac, Michal B. ;
Humphray, Sean ;
Lucassen, Anneke ;
Holmes, Christopher C. ;
Bentley, David ;
Donnelly, Peter ;
Taylor, Jenny ;
Petridis, Christos ;
Roylance, Rebecca ;
Sawyer, Elinor J. ;
Kerr, David J. ;
Clark, Susan ;
Grimes, Jonathan ;
Kearsey, Stephen E. ;
Thomas, Huw J. W. ;
McVean, Gilean ;
Houlston, Richard S. ;
Tomlinson, Ian .
NATURE GENETICS, 2013, 45 (02) :136-144