The complete mitochondrial genome sequence of Eophona migratoria (Passeriformes Fringillidae)

被引：9

作者：

Sun, Guolei ^{[1
]}

Xia, Tian ^{[1
]}

Yang, Xiufeng ^{[1
]}

Zhao, Chao ^{[1
]}

Liu, Guangshuai ^{[2
]}

Sha, Weilai ^{[1
]}

Zhang, Honghai ^{[1
]}

机构：

[1] Qufu Normal Univ, Qufu 273165, Peoples R China

[2] Northeast Forestry Univ, Harbin, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期

关键词：

Eophona migratoria; mitochondrion genome; phylogenetic analysis; AVES;

D O I：

10.1080/23802359.2016.1209098

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The complete mitochondrial genome (mitogenome) sequence of Eophona migratoria was determined by shotgun sequencing and reported for the first time using the muscle tissue. The total length of the sequence is 16,798 bp, which contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, 1 control region, and 1 extra pseudo-control region. A phylogenetic analysis on the basis of 12 protein-coding genes of 14 passeriformes species' mitochondrial genomes using maximum-likelihood (ML) demonstrated that Coccothraustes coccothraustes is the most close to E. migratoria.

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收藏

页码：753 / 754

页数：2

相关论文

共 11 条

[1] Animal mitochondrial genomes [J].

Boore, JL .

NUCLEIC ACIDS RESEARCH, 1999, 27 (08) :1767-1780

[2] EVOLUTIONARY TREES FROM DNA-SEQUENCES - A MAXIMUM-LIKELIHOOD APPROACH [J].

FELSENSTEIN, J .

JOURNAL OF MOLECULAR EVOLUTION, 1981, 17 (06) :368-376

[3] Rates and patterns of mitochondrial DNA sequence evolution in fringilline finches (Fringilla spp.) and the greenfinch (Carduelis chloris) [J].

Marshall, HD ;

Baker, AJ .

MOLECULAR BIOLOGY AND EVOLUTION, 1998, 15 (06) :638-646

[4]

Questiau S, 1999, HEREDITY, V83, P196, DOI 10.1038/sj.hdy.6885510

[5] Genetic structuring of Latris lineata at localized and transoceanic scales [J].

Tracey, Sean R. ;

Smolenski, Adam ;

Lyle, Jeremy M. .

MARINE BIOLOGY, 2007, 152 (01) :119-128

[6]

Wilgenbusch James C, 2003, Curr Protoc Bioinformatics, VChapter 6, DOI 10.1002/0471250953.bi0604s00

[7] The complete mitochondrial genome of Zosterops japonicas (Aves, Zosteropidae) [J].

Yang, Dian-Cheng ;

Sun, Yong ;

Lu, Chang-Hu .

MITOCHONDRIAL DNA PART A, 2016, 27 (06) :4611-4612

[8] Molecular phylogenetic analysis of Fringillidae, "New World nine-primaried oscines" (Aves: Passeriformes) [J].

Yuri, T ;

Mindell, DP .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2002, 23 (02) :229-243

[9] The complete mitochondrial genome sequence of the Sparrowhawk (Accipiter nisus) [J].

Zhang, Honghai ;

Dou, Huashan ;

Yang, Xiufeng ;

Zhao, Chao ;

Liu, Guangshuai ;

Zhang, Jin .

MITOCHONDRIAL DNA PART A, 2016, 27 (03) :1648-1649

[10] The complete mitochondrial genome of the Tibetan fox (Vulpes ferrilata) and implications for the phylogeny of Canidae [J].

Zhao, Chao ;

Zhang, Honghai ;

Liu, Guangshuai ;

Yang, Xiufeng ;

Zhang, Jin .

COMPTES RENDUS BIOLOGIES, 2016, 339 (02) :68-77