Primitive selection of the fittest emerging through functional synergy in nucleopeptide networks

被引:26
作者
Bandela, Anil Kumar [1 ]
Wagner, Nathaniel [1 ]
Sadihov, Hava [1 ]
Morales-Reina, Sara [2 ]
Chotera-Ouda, Agata [1 ,4 ]
Basu, Kingshuk [1 ]
Cohen-Luria, Rivka [1 ]
de la Escosura, Andres [2 ,3 ]
Ashkenasy, Gonen [1 ]
机构
[1] Ben Gurion Univ Negev, Dept Chem, IL-84105 Beer Sheva, Israel
[2] Univ Autonoma Madrid, Dept Organ Chem, Campus Cantoblanco, Madrid 28049, Spain
[3] Inst Adv Res Chem, Madrid 28049, Spain
[4] Polish Acad Sci, Ctr Mol & Macromol Studies, PL-90363 Lodz, Poland
基金
欧盟地平线“2020”; 美国国家科学基金会;
关键词
chemical evolution; nucleic-acid peptide conjugates; self-replication; molecular networks; BASE-PAIR; RNA; ADENINE; PHOSPHORYLATION; 2-AMINOPURINE; MECHANISMS; PRECURSORS; COMPLEXES; EMERGENCE; CYTOSINE;
D O I
10.1073/pnas.2015285118
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Many fundamental cellular and viral functions, including replication and translation, involve complex ensembles hosting synergistic activity between nucleic acids and proteins/peptides. There is ample evidence indicating that the chemical precursors of both nucleic acids and peptides could be efficiently formed in the prebiotic environment. Yet, studies on nonenzymatic replication, a central mechanism driving early chemical evolution, have focused largely on the activity of each class of these molecules separately. We show here that short nucleopeptide chimeras can replicate through autocatalytic and cross-catalytic processes, governed synergistically by the hybridization of the nucleobase motifs and the assembly propensity of the peptide segments. Unequal assembly-dependent replication induces clear selectivity toward the formation of a certain species within small networks of complementary nucleopeptides. The selectivity pattern may be influenced and indeed maximized to the point of almost extinction of the weakest replicator when the system is studied far from equilibrium and manipulated through changes in the physical (flow) and chemical (template and inhibition) conditions. We postulate that similar processes may have led to the emergence of the first functional nucleic-acid-peptide assemblies prior to the origin of life. Furthermore, spontaneous formation of related replicating complexes could potentially mark the initiation point for information transfer and rapid progression in complexity within primitive environments, which would have facilitated the development of a variety of functions found in extant biological assemblies.
引用
收藏
页数:8
相关论文
共 69 条
  • [1] Systems chemistry
    Ashkenasy, Gonen
    Hermans, Thomas M.
    Otto, Sijbren
    Taylor, Annette F.
    [J]. CHEMICAL SOCIETY REVIEWS, 2017, 46 (09) : 2543 - 2554
  • [2] Aumiller WM, 2016, NAT CHEM, V8, P129, DOI [10.1038/NCHEM.2414, 10.1038/nchem.2414]
  • [3] Bai YS, 2018, CHEM SOC REV, V47, P5444, DOI 10.1039/c8cs00174j
  • [4] Mechanisms of Autocatalysis
    Bissette, Andrew J.
    Fletcher, Stephen P.
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2013, 52 (49) : 12800 - 12826
  • [5] Prebiotic iron-sulfur peptide catalysts generate a pH gradient across model membranes of late protocells
    Bonfio, Claudia
    Godino, Elisa
    Corsini, Maddalena
    de Biani, Fabrizia Fabrizi
    Guella, Graziano
    Mansy, Sheref S.
    [J]. NATURE CATALYSIS, 2018, 1 (08): : 616 - 623
  • [6] Root of the Tree: The Significance, Evolution, and Origins of the Ribosome
    Bowman, Jessica C.
    Petrov, Anton S.
    Frenkel-Pinter, Moran
    Penev, Petar, I
    Williams, Loren Dean
    [J]. CHEMICAL REVIEWS, 2020, 120 (11) : 4848 - 4878
  • [7] IR Vibrational spectra of H-bonded complexes of adenine, 2-aminopurine and 2-aminopurine+ with cytosine and thymine: Quantum-chemical study
    Brovarets, O. O.
    Hovorun, D. M.
    [J]. OPTICS AND SPECTROSCOPY, 2011, 111 (05) : 750 - 757
  • [8] Hierarchical Assembly of Nucleic Acid/Coiled-Coil Peptide Nanostructures
    Buchberger, Alex
    Simmons, Chad R.
    Fahmi, Nour Eddine
    Freeman, Ronit
    Stephanopoulos, Nicholas
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2020, 142 (03) : 1406 - 1416
  • [9] Proton Transfer and Tautomerism in 2-Aminopurine-Thymine and Pyrrolocytosine-Guanine Base Pairs
    Bull, Graham D.
    Thompson, Katherine C.
    [J]. BIOCHEMISTRY, 2018, 57 (30) : 4547 - 4561
  • [10] Robustness, Entrainment, and Hybridization in Dissipative Molecular Networks, and the Origin of Life
    Cafferty, Brian J.
    Wong, Albert S. Y.
    Semenov, Sergey N.
    Belding, Lee
    Gmur, Samira
    Huck, Wilhelm T. S.
    Whitesides, George M.
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2019, 141 (20) : 8289 - 8295