Ancient, highly conserved proteins from a LUCA with complex cell biology provide evidence in support of the nuclear compartment commonality (NuCom) hypothesis

被引：7

作者：

Staley, James T. ^{[1
,2
]}

Fuerst, John A. ^{[3
]}

机构：

[1] Univ Washington, Dept Microbiol, Seattle, WA 98195 USA

[2] Univ Washington, Astrobiol Program, Seattle, WA 98195 USA

[3] Univ Queensland, Sch Chem & Mol Biosci, St Lucia, Qld 4072, Australia

来源：

RESEARCH IN MICROBIOLOGY | 2017年 / 168卷 / 05期

基金：

澳大利亚研究理事会;

关键词：

LUCA; PVC superphylum; Planctomycetes; Verrucomicrobia; Origin of eukaryotes; Ancient cell compartmentalization; PHYLUM VERRUCOMICROBIA; REDUCTIVE EVOLUTION; STEROL SYNTHESIS; DOMAINS ARCHAEA; ORIGIN; MEMBRANE; ANCESTOR; EUKARYOTES; BACTERIA; PHYLOGENY;

D O I：

10.1016/j.resmic.2017.01.001

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

The nuclear compartment commonality (NuCom) hypothesis posits a complex last common ancestor (LUCA) with membranous compartments including a nuclear membrane. Such a LUCA then evolved to produce two nucleated lineages of the tree of life: the Planctomycetese-Verrucomicrobiae-Chlamydia superphylum (PVC) within the Bacteria, and the Eukarya. We propose that a group of ancient essential protokaryotic signature proteins (PSPs) originating in LUCAwere incorporated into ancestors of PVC Bacteria and Eukarya. Tubulins, ubiquitin system enzymes and sterol-synthesizing enzymes are consistent with early origins of these features shared between the PVC superphylum and Eukarya. (C) 2017 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved .

引用

页码：395 / 412

页数：18

共 113 条

[1] Serine/threonine kinases and E2-ubiquitin conjugating enzymes in Planctomycetes: unexpected findings [J].

Arcas, Aida ;

Cases, Ildefonso ;

Rojas, Ana M. .

ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2013, 104 (04) :509-520

[2] Parallel adaptations to high temperatures in the Archaean eon [J].

Boussau, Bastien ;

Blanquart, Samuel ;

Necsulea, Anamaria ;

Lartillot, Nicolas ;

Gouy, Manolo .

NATURE, 2008, 456 (7224) :942-U74

[3] An empirical assessment of long-branch attraction artefacts in deep eukaryotic phylogenomics [J].

Brinkmann, H ;

Van der Giezen, M ;

Zhou, Y ;

De Raucourt, GP ;

Philippe, H .

SYSTEMATIC BIOLOGY, 2005, 54 (05) :743-757

[4] Archaea sister group of bacteria? Indications from tree reconstruction artifacts in ancient phylogenies [J].

Brinkmann, H ;

Philippe, H .

MOLECULAR BIOLOGY AND EVOLUTION, 1999, 16 (06) :817-825

[5] Nuclear protein-coding genes support lungfish and not the coelacanth as the closest living relatives of land vertebrates [J].

Brinkmann, H ;

Venkatesh, B ;

Brenner, S ;

Meyer, A .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (14) :4900-4905

[6] Phylogeny - A non-hyperthermophilic ancestor for bacteria [J].

Brochier, C ;

Philippe, H .

NATURE, 2002, 417 (6886) :244-244

[7] Universal trees based on large combined protein sequence data sets [J].

Brown, JR ;

Douady, CJ ;

Italia, MJ ;

Marshall, WE ;

Stanhope, MJ .

NATURE GENETICS, 2001, 28 (03) :281-285

[8]

Burroughs AM, 2012, METHODS MOL BIOL, V832, P15, DOI 10.1007/978-1-61779-474-2_2

[9] Functional diversification of the RING finger and other binuclear treble clef domains in prokaryotes and the early evolution of the ubiquitin system [J].

Burroughs, A. Maxwell ;

Iyer, Lakshminarayan M. ;

Aravind, L. .

MOLECULAR BIOSYSTEMS, 2011, 7 (07) :2261-2277

[10] The Coevolutionary Roots of Biochemistry and Cellular Organization Challenge the RNA World Paradigm [J].

Caetano-Anolles, Gustavo ;

Seufferheld, Manfredo J. .

JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY, 2013, 23 (1-2) :152-177

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