Multiple quantitative trait loci contribute to resistance to bacterial canker incited by Pseudomonas syringae pv. actinidiae in kiwifruit (Actinidia chinensis)

被引:35
作者
Tahir, Jibran [1 ]
Hoyte, Stephen [2 ]
Bassett, Heather [1 ]
Brendolise, Cyril [3 ]
Chatterjee, Abhishek [3 ]
Templeton, Kerry [3 ]
Deng, Cecilia [3 ]
Crowhurst, Ross [3 ]
Montefiori, Mirco [4 ]
Morgan, Ed [1 ]
Wotton, Andrew [1 ]
Funnell, Keith [1 ]
Wiedow, Claudia [1 ]
Knaebel, Mareike [1 ]
Hedderley, Duncan [1 ]
Vanneste, Joel [2 ]
McCallum, John [5 ]
Hoeata, Kirsten [6 ]
Nath, Amardeep [6 ]
Chagne, David [1 ]
Gea, Luis [6 ]
Gardiner, Susan E. [1 ]
机构
[1] New Zealand Inst Plant & Food Res Ltd, Manawatu Mai & Ctr, Private Bag 11030, Palmerston North 4442, New Zealand
[2] New Zealand Inst Plant Food Res Ltd, Hamilton, New Zealand
[3] New Zealand Inst Plant & Food Res Ltd, Private Bag 92-169, Auckland 1025, New Zealand
[4] New Plant, Via Malpighi 5, I-47122 Forli, Italy
[5] New Zealand Inst Plant & Food Res Ltd, Lincoln, New Zealand
[6] New Zealand Inst Plant & Food Res Ltd, 412 1 Rd,RD2, Te Puke 3182, New Zealand
关键词
NEW-ZEALAND; ARABIDOPSIS; DEFENSE; PATHOGEN; SURVIVAL; DISEASE; PSA; DURABILITY; EVOLUTION; OUTBREAK;
D O I
10.1038/s41438-019-0184-9
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Pseudomonas syringae pv. actinidiae (Psa) biovar 3, a virulent, canker-inducing pathogen is an economic threat to the kiwifruit (Actinidia spp.) industry worldwide. The commercially grown diploid (2x) A. chinensis var. chinensis is more susceptible to Psa than tetraploid and hexaploid kiwifruit. However information on the genetic loci modulating Psa resistance in kiwifruit is not available. Here we report mapping of quantitative trait loci (QTLs) regulating resistance to Psa in a diploid kiwifruit population, derived from a cross between an elite Psa-susceptible 'Hort16A' and a resistant male breeding parent P1. Using high-density genetic maps and intensive phenotyping, we identified a single QTL for Psa resistance on Linkage Group (LG) 27 of 'Hort16A' revealing 16-19% phenotypic variance and candidate alleles for susceptibility and resistance at this loci. In addition, six minor QTLs were identified in P1 on distinct LGs, exerting 4-9% variance. Resistance in the Fl population is improved by additive effects from 'Hort16A' and P1 QTLs providing evidence that divergent genetic pathways interact to combat the virulent Psa strain. Two different bioassays further identified new QTLs for tissue-specific responses to Psa. The genetic marker at LG27 QTL was further verified for association with Psa resistance in diploid Actinidia chinensis populations. Transcriptome analysis of Psa-resistant and susceptible genotypes in field revealed hallmarks of basal defense and provided candidate RNA-biomarkers for screening for Psa resistance in greenhouse conditions.
引用
收藏
页数:18
相关论文
共 94 条
[91]   Whole transcriptome sequencing of Pseudomonas syringae pv. actinidiae-infected kiwifruit plants reveals species-specific interaction between long non-coding RNA and coding genes [J].
Wang, Zupeng ;
Liu, Yifei ;
Li, Li ;
Li, Dawei ;
Zhang, Qiong ;
Guo, Yangtao ;
Wang, Shuaibin ;
Zhong, Caihong ;
Huang, Hongwen .
SCIENTIFIC REPORTS, 2017, 7
[92]   Pseudomonas syringae: what it takes to be a pathogen [J].
Xin, Xiu-Fang ;
Kvitko, Brian ;
He, Sheng Yang .
NATURE REVIEWS MICROBIOLOGY, 2018, 16 (05) :316-328
[93]   Bacteria establish an aqueous living space in plants crucial for virulence [J].
Xin, Xiu-Fang ;
Nomura, Kinya ;
Aung, Kyaw ;
Velasquez, Andre C. ;
Yao, Jian ;
Boutrot, Freddy ;
Chang, Jeff H. ;
Zipfel, Cyril ;
He, Sheng Yang .
NATURE, 2016, 539 (7630) :524-+
[94]   MADS1, a novel MADS-box protein, is involved in the response of Nicotiana benthamiana to bacterial harpinXoo [J].
Zhang, Huajian ;
Teng, Wenjun ;
Liang, Jingang ;
Liu, Xinyu ;
Zhang, Haifeng ;
Zhang, Zhengguang ;
Zheng, Xiaobo .
JOURNAL OF EXPERIMENTAL BOTANY, 2016, 67 (01) :131-141