Complete mitochondrial genome sequence of E. suratensis revealed by next generation sequencing

被引：2
|
作者：
Mohanta, Sudip K. [1 ]
Swain, Subrat K. [2 ]
Das, Sofia P. [2 ]
Bit, Amrita [2 ]
Das, Gargee [2 ]
Pradhan, Sanghamitra [2 ]
Sundaray, Jitendra K. [2 ]
Jayasankar, P. [2 ]
Ninawe, A. S. [3 ]
Das, Paramananda [2 ]
机构：
[1] Banabhumi Degree Mahavidyalaya, Dept Zool, Rangamatia, Odisha, India
[2] ICAR Cent Inst Freshwater Aquaculture, Fish Genet & Biotechnol Div, Bhubaneswar, Odisha, India
[3] Govt India, Dept Biotechnol, New Delhi, India
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期
关键词：
Etroplus suratensis; mitogenome; cichlidae; NGS method; sequence; FISHES; ACTINOPTERYGII;
D O I：
10.1080/23802359.2016.1176877
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
The complete mitochondrial genome of Etroplus suratensis, the Green chromide cichlid, was determined for the first time through NGS method. The genome is 16,467 bp (Accession no. KU301747) in length and consisted of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and one control region. Organization of genes and their order are in accordance with other vertebrates. The overall base composition on plus strand was A: 28.3%, G: 15.2%, C: 30.9%, T: 25.6%, and the A+T content 53.9%. The control region contains a putative termination-associated sequence and three conserved sequence blocks. This mitogenome sequence data would play an important role in population genetics and phylogenetics of cichlid fish of India.
引用
收藏
页码：746 / 747
页数：2
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