Identification of Five Glycolysis-Related Gene Signature and Risk Score Model for Colorectal Cancer

被引:34
作者
Zhu, Jun [1 ]
Wang, Shuai [1 ]
Bai, Han [2 ]
Wang, Ke [1 ]
Hao, Jun [3 ]
Zhang, Jian [4 ]
Li, Jipeng [1 ]
机构
[1] Fourth Mil Med Univ, Inst Digest Dis, Xijing Hosp, State Key Lab Canc Biol, Xian, Peoples R China
[2] Fourth Mil Med Univ, Xijing Hosp, Dept Radiat Oncol, Xian, Peoples R China
[3] Fourth Mil Med Univ, Xijing Hosp, Dept Expt Surg, Xian, Peoples R China
[4] Fourth Mil Med Univ, Dept Biochem & Mol Biol, State Key Lab Canc Biol, Xian, Peoples R China
来源
FRONTIERS IN ONCOLOGY | 2021年 / 11卷
基金
中国国家自然科学基金;
关键词
glycolytic gene; prognosis analysis; colorectal cancer; GPC1; ENO3; P4HA1; SPAG4; STC2;
D O I
10.3389/fonc.2021.588811
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Metabolic changes, especially in glucose metabolism, are widely established during the occurrence and development of tumors and regarded as biological markers of pan-cancer. The well-known 'Warburg effect' demonstrates that cancer cells prefer aerobic glycolysis even if there is sufficient ambient oxygen. Accumulating evidence suggests that aerobic glycolysis plays a pivotal role in colorectal cancer (CRC) development. However, few studies have examined the relationship of glycolytic gene clusters with prognosis of CRC patients. Here, our aim is to build a glycolysis-associated gene signature as a biomarker for colorectal cancer. The mRNA sequencing and corresponding clinical data were downloaded from TCGA and GEO databases. Gene set enrichment analysis (GSEA) was performed, indicating that four gene clusters were significantly enriched, which revealed the inextricable relationship of CRC with glycolysis. By comparing gene expression of cancer and adjacent samples, 236 genes were identified. Univariate, multivariate, and LASSO Cox regression analyses screened out five prognostic-related genes (ENO3, GPC1, P4HA1, SPAG4, and STC2). Kaplan-Meier curves and receiver operating characteristic curves (ROC, AUC = 0.766) showed that the risk model could become an effective prognostic indicator (P < 0.001). Multivariate Cox analysis also revealed that this risk model is independent of age and TNM stages. We further validated this risk model in external cohorts (GES38832 and GSE39582), showing these five glycolytic genes could emerge as reliable predictors for CRC patients' outcomes. Lastly, based on five genes and risk score, we construct a nomogram model assessed by C-index (0.7905) and calibration plot. In conclusion, we highlighted the clinical significance of glycolysis in CRC and constructed a glycolysis-related prognostic model, providing a promising target for glycolysis regulation in CRC.
引用
收藏
页数:15
相关论文
共 48 条
[1]   Serum lactate dehydrogenase levels and glycolysis significantly correlate with tumor VEGFA and VEGFR expression in metastatic CRC patients [J].
Azuma, Mizutomo ;
Shi, Michael ;
Danenberg, Kathleen D. ;
Gardner, Humphrey ;
Barrett, Carl ;
Jacques, Christian J. ;
Sherod, Andrew ;
Iqbal, Syma ;
El-Khoueiry, Anthony ;
Yang, Dongyun ;
Zhang, Wu ;
Danenberg, Peter V. ;
Lenz, Heinz-Josef .
PHARMACOGENOMICS, 2007, 8 (12) :1705-1713
[2]   A Knowledge-Based Machine Learning Approach to Gene Prioritisation in Amyotrophic Lateral Sclerosis [J].
Bean, Daniel M. ;
Al-Chalabi, Ammar ;
Dobson, Richard J. B. ;
Iacoangeli, Alfredo .
GENES, 2020, 11 (06) :1-17
[3]   LncRNA-FEZFl-AS1 Promotes Tumor Proliferation and Metastasis in Colorectal Cancer by Regulating PKM2 Signaling [J].
Bian, Zehua ;
Zhang, Jiwei ;
Li, Min ;
Feng, Yuyang ;
Wang, Xue ;
Zhang, Jia ;
Yao, Surui ;
Jin, Guoying ;
Du, Jun ;
Han, Weifeng ;
Yin, Yuan ;
Huang, Shenglin ;
Fei, Bojian ;
Zou, Jian ;
Huang, Zhaohui .
CLINICAL CANCER RESEARCH, 2018, 24 (19) :4808-4819
[4]  
Bray F, 2018, CA-CANCER J CLIN, V68, P394, DOI [10.3322/caac.21492, 10.3322/caac.21609]
[5]   Colorectal Cancer and Metabolism [J].
Brown, Rachel E. ;
Short, Sarah P. ;
Williams, Christopher S. .
CURRENT COLORECTAL CANCER REPORTS, 2018, 14 (06) :226-241
[6]   P4HA1/HIF1α feedback loop drives the glycolytic and malignant phenotypes of pancreatic cancer [J].
Cao, X. P. ;
Cao, Y. ;
Li, W. J. ;
Zhang, H. H. ;
Zhu, Z. M. .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2019, 516 (03) :606-612
[7]   Colorectal cancer [J].
Dekker, Evelien ;
Tanis, Pieter J. ;
Vleugels, Jasper L. A. ;
Kasi, Pashtoon M. ;
Wallace, Michael B. .
LANCET, 2019, 394 (10207) :1467-1480
[8]   Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012 [J].
Ferlay, Jacques ;
Soerjomataram, Isabelle ;
Dikshit, Rajesh ;
Eser, Sultan ;
Mathers, Colin ;
Rebelo, Marise ;
Parkin, Donald Maxwell ;
Forman, David ;
Bray, Freddie .
INTERNATIONAL JOURNAL OF CANCER, 2015, 136 (05) :E359-E386
[9]   Up-regulation and stabilization of HIF-1α in colorectal carcinomas [J].
Furlan, Daniela ;
Sahnane, Nora ;
Carnevali, Ileana ;
Cerutti, Roberta ;
Uccella, Silvia ;
Bertolini, Valentina ;
Chiaravalli, Anna Maria ;
Capella, Carlo .
SURGICAL ONCOLOGY-OXFORD, 2007, 16 :S25-S27
[10]   Why do cancers have high aerobic glycolysis? [J].
Gatenby, RA ;
Gillies, RJ .
NATURE REVIEWS CANCER, 2004, 4 (11) :891-899