Applying CRISPR-Cas9 Off-Target Editing on DNA based Steganography

被引:0
作者
Zhou, Hong [1 ]
Huan, Xiaoli [2 ]
机构
[1] Univ St Joseph, Dept Math Sci, Hartford, CT 06117 USA
[2] Troy Univ, Dept Comp Sci, Troy, AL USA
关键词
DNA; steganography; CRISPR; Cas9; sgRNA; off-target; substitution; SPECIFICITY; INSERTIONS; DELETIONS; SITES;
D O I
暂无
中图分类号
TP301 [理论、方法];
学科分类号
081202 ;
摘要
Different from cryptography which encodes data into an incomprehensible format difficult to decrypt, steganography hides the trace of data and therefore minimizes attention to the hidden data. To hide data, a carrier body must be utilized. In addition to the traditional data carriers including images, audios, and videos, DNA emerges as another promising data carrier due to its high capacity and complexity. Currently, DNA based steganography can be practiced with either biological DNA substances or digital DNA sequences. In this article, we present a digital DNA steganography approach that utilizes the CRISPR-Cas9 off-target editing such that the secret message is fragmented into multiple sgRNA homologous sequences in the genome. Retrieval of the hidden message mimics the Cas9 off-target detection process which can be accelerated by computer software. The feasibility of this approach is analyzed, and practical concerns are discussed.
引用
收藏
页码:1 / 5
页数:5
相关论文
共 26 条
  • [1] MOLECULAR COMPUTATION OF SOLUTIONS TO COMBINATORIAL PROBLEMS
    ADLEMAN, LM
    [J]. SCIENCE, 1994, 266 (5187) : 1021 - 1024
  • [2] Bae H., 2019, PACIFIC S BIOCOMPUTI
  • [3] Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases
    Bae, Sangsu
    Park, Jeongbin
    Kim, Jin-Soo
    [J]. BIOINFORMATICS, 2014, 30 (10) : 1473 - 1475
  • [4] Bailey K, 2006, MULTIMED TOOLS APPL, V30, P55, DOI 10.1007/s11042-006-0008-4
  • [5] Hiding messages in DNA microdots
    Clelland, CT
    Risca, V
    Bancroft, C
    [J]. NATURE, 1999, 399 (6736) : 533 - 534
  • [6] An Improved DNA based Dual Cover Steganography
    Das, Prasenjit
    Deb, Subhrajyoti
    Kar, Nirmalya
    Bhattacharya, Baby
    [J]. PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON INFORMATION AND COMMUNICATION TECHNOLOGIES, ICICT 2014, 2015, 46 : 604 - 611
  • [7] Dilovan A.Z., 2017, INT J APPL ENG RES, V12, Number, P15363
  • [8] Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9
    Doench, John G.
    Fusi, Nicolo
    Sullender, Meagan
    Hegde, Mudra
    Vaimberg, Emma W.
    Donovan, Katherine F.
    Smith, Ian
    Tothova, Zuzana
    Wilen, Craig
    Orchard, Robert
    Virgin, Herbert W.
    Listgarten, Jennifer
    Root, David E.
    [J]. NATURE BIOTECHNOLOGY, 2016, 34 (02) : 184 - +
  • [9] Improving CRISPR-Cas nuclease specificity using truncated guide RNAs
    Fu, Yanfang
    Sander, Jeffry D.
    Reyon, Deepak
    Cascio, Vincent M.
    Joung, J. Keith
    [J]. NATURE BIOTECHNOLOGY, 2014, 32 (03) : 279 - 284
  • [10] High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells
    Fu, Yanfang
    Foden, Jennifer A.
    Khayter, Cyd
    Maeder, Morgan L.
    Reyon, Deepak
    Joung, J. Keith
    Sander, Jeffry D.
    [J]. NATURE BIOTECHNOLOGY, 2013, 31 (09) : 822 - +