The complete mitochondrial genome of Lacerta bilineata and comparison with its closely related congener L. Viridis

被引：6

作者：

Kolora, Rohit ^{[1
,3
]}

Faria, Rui ^{[6
,7
,9
,11
,12
]}

Weigert, Anne ^{[2
,5
,10
]}

Schaffer, Stefan ^{[1
,11
]}

Grimm, Annegret ^{[4
,5
,10
,11
,14
]}

Henle, Klaus ^{[7
]}

Sahyoun, Abdullah H. ^{[2
,13
]}

Stadler, Peter F. ^{[1
,3
,5
,14
]}

Nowick, Katja ^{[1
,5
,6
,7
,8
,11
]}

Bleidorn, Christoph ^{[2
,8
,9
,10
,13
,14
]}

Schlegel, Martin ^{[1
,4
,6
,10
,12
]}

机构：

[1] German Ctr Integrat Biodivers Res iDiv, Leipzig, Germany

[2] Univ Leipzig, Inst Biol, Mol Evolut & Systemat Anim, Leipzig, Germany

[3] Univ Leipzig, Dept Comp Sci, Bioinformat Grp, & Interdisciplinary Ctr Bioinformat, Leipzig, Germany

[4] Univ Porto, Ctr Invest Biodiversidade Recursos Genet, Laboratorio Associado, CIBIO, Campus Agrcirio Vairao, Vairtio, Portugal

[5] Univ Pompeu Fabra, CSIC, PRBB, Inst Evolutionary Biol, Barcelona, Catalonia, Spain

[6] Max Planck Inst Evolutionary Anthropol, Deutsch Pl 6, Leipzig, Germany

[7] Helmholtz Ctr Environm Res, UFZ, Dept Conservat Biol, Leipzig, Germany

[8] Univ Leipzig, Paul Flechsig Inst Brain Res, Leipzig, Germany

[9] Max Planck Inst Neuropsychol Forsch, Leipzig, Germany

[10] Fraunhofer Inst Zelltherapie & Immunol, Leipzig, Germany

[11] Univ Vienna, Dept Theoret Chem, Vienna, Austria

[12] Univ Copenhagen, Ctr Noncoding RNA Technol & Hlth, Frederiksberg, Denmark

[13] Santa Fe Inst, Santa Fe, NM 87501 USA

[14] Univ Leipzig, Interdisciplinary Ctr Bioinformat, Dept Comp Sci, TFome Res Grp,Bioinformat Grp, Leipzig, Germany

来源：

MITOCHONDRIAL DNA PART A | 2017年 / 28卷 / 1-2期

关键词：

Complete mitochondria genome; Illumina sequencing; Lacerta bilineata; Lacerta viridis; Lacertinae; phylogeny; GREEN LIZARDS; NUCLEAR-DNA; PHYLOGENY; SQUAMATA;

D O I：

10.3109/19401736.2015.1111349

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

We sequenced the mitochondrial genome of the Western green lizard (Lacerta bilineata) using Illumina technology and additional Sanger sequencing. The assembled 17 086 bp mitogenome had a GC content of 40.32% and consisted of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and one control region (CR), with a gene order identical to the chordate consensus. In addition, we re-sequenced the mitogenome of the closely related Eastern green lizard L. viridis using the same techniques as for L bilineata. The mitogenomes of L. bilineata and L. viridis showed a sequence identity of 94.4% and 99.9%, respectively, relative to the previously published L viridis mitogenome. The phylogenetic reconstruction based on 17 Lacertinae mitogenomes using Anolis carolinensis as the outgroup supported L. bilineata and its sister species L. viridis as distinct lineages.

引用

页码：116 / 118

页数：3

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