Investigation of guanosine-quartet assemblies by vibrational and electronic circular dichroism spectroscopy, a novel approach for studying supramolecular entities

被引:55
作者
Setnicka, Vladimir
Urbanova, Marie
Volka, Karel
Nampally, Sreenivasachary
Lehn, Jean-Marie
机构
[1] Inst Chem Technol, CR-16628 Prague 6, Czech Republic
[2] Univ Strasbourg, CNRS, UMR 7006, ISIS, F-67083 Strasbourg, France
关键词
circular dichroism; guanosine; hydrogels; self-assembly; supramolecular chemistry;
D O I
10.1002/chem.200500973
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The self-assembly of guanosine-5'-hydrazide G-1 in D2O, in the presence and absence of sodium cations, has been investigated by chiroptical techniques: electronic (ECD) and the newly introduced vibrational (VCD) circular dichroism spectroscopy. Using a combination of ECD and VCD with other methods such as IR, electron microscopy, and electrospray ionization mass spectrometry (ESI-MS) it was found that G-1 produces long-range chiral aggregates consisting of G-quartets, (G-1)(4), subsequently stacked into columns, [(G-1)(4)](n), induced by binding of metal cations between the (G-1)(4) species. This process, accompanied by gelation of the sample, is highly efficient in the presence of an excess of sodium cations, leading to aggregates with strong quartet-quartet interaction. Thermally induced conformational changes and conformational stability of guanosine-5'-hydrazide assemblies were studied by chiroptical techniques and the melting temperature of the hydrogels formed was obtained. The temperature-dependent experiments indicate that the long-range supramolecular aggregates are dissociated by increasing temperature into less ordered species, monomers, or other intermediates in equilibrium, as indicated by MS experiments.
引用
收藏
页码:8735 / 8743
页数:9
相关论文
共 77 条
[1]   Vibrational circular dichroism and IR absorption of DNA complexes with Cu2+ ions [J].
Andrushchenko, V ;
van de Sande, JH ;
Wieser, H .
BIOPOLYMERS, 2003, 72 (05) :374-390
[2]   Complexes of (dG-dC)20 with Mn2+ ions:: A study by vibrational circular dichroism and infrared absorption spectroscopy [J].
Andrushchenko, VV ;
van de Sande, JH ;
Wieser, H ;
Kornilova, SV ;
Blagoi, YP .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 1999, 17 (03) :545-560
[3]  
[Anonymous], 2000, CIRCULAR DICHROISM P
[4]  
[Anonymous], ANGEW CHEM
[5]   A library of IR bands of nucleic acids in solution [J].
Banyay, M ;
Sarkar, M ;
Gräslund, A .
BIOPHYSICAL CHEMISTRY, 2003, 104 (02) :477-488
[6]  
Berova N., 2000, Circular Dichroism: Principles and Applications
[7]  
Bour P, 2000, CHIRALITY, V12, P191, DOI 10.1002/(SICI)1520-636X(2000)12:4<191::AID-CHIR5>3.0.CO
[8]  
2-W
[9]   Cation-directed self-assembly of lipophilic nucleosides: the cation's central role in the structure and dynamics of a hydrogen-bonded assembly [J].
Cai, MM ;
Shi, XD ;
Sidorov, V ;
Fabris, D ;
Lam, YF ;
Davis, JT .
TETRAHEDRON, 2002, 58 (04) :661-671
[10]   G-quartet biomolecular nanowires [J].
Calzolari, A ;
Di Felice, R ;
Molinari, E ;
Garbesi, A .
APPLIED PHYSICS LETTERS, 2002, 80 (18) :3331-3333