Objective and comprehensive re-evaluation of anxiety-like behaviors in mice using the Behavior Atlas

被引:9
作者
Liu, Nan [1 ,2 ,3 ]
Han, Yaning [1 ,2 ,3 ]
Ding, Hui [1 ,2 ]
Huang, Kang [1 ,2 ,3 ]
Wei, Pengfei [1 ,2 ,3 ]
Wang, Liping [1 ,2 ,3 ]
机构
[1] Chinese Acad Sci, Shenzhen Hong Kong Inst Brain Sci Fundamental Res, Shenzhen Key Lab Neuropsychiat Modulat, Shenzhen, Peoples R China
[2] Chinese Acad Sci, Brain Cognit & Brain Dis Inst BCBDI,Shenzhen Hong, Collaborat Innovat Ctr Brain Sci,CAS Ctr Excellen, Shenzhen Inst Adv Technol,Guangdong Prov Key Lab, Shenzhen, Peoples R China
[3] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
基金
中国国家自然科学基金; 国家重点研发计划;
关键词
Anxiety; Elevated plus maze; Open field test; Computational ethology; Behavioral features;
D O I
10.1016/j.bbrc.2021.03.125
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Various animal models of anxiety have been developed to evaluate anxiety and anxiolytic drugs. However, non-uniform measuring paradigms, variability in apparatus use and individual differences in animals confound study results. In this study, when all animals were included in the data analysis, we found no significant differences between control and stressed mice using standard behavioral paradigms for assessing anxiety (elevated plus maze and open field test). To provide a better assessment of anxiety, we therefore used a machine learning approach to analyze the behavioral patterns of each animal, and selected typical subjects in each group for use as a training set according to classical anxiety parameters. Spontaneous behaviors in these animals were captured by multi-view cameras and decomposed into sub-second modules using Behavior Atlas, and six behavioral features providing statistically significant difference between stressed and control mice were identified. Combined with low-dimensional embedding and clustering, new features were used to discriminate stressed mice from controls, in both the training set and all objects. Our results show Behavior Atlas is a powerful approach for identifying new potential biomarkers in an unbiased fashion. Our approach can complement classical measuring paradigms to objectively and comprehensively evaluate anxiety-like behaviors. ? 2021 Elsevier Inc. All rights reserved.
引用
收藏
页码:1 / 7
页数:7
相关论文
共 35 条
[1]   Hippocampal neurogenesis confers stress resilience by inhibiting the ventral dentate gyrus [J].
Anacker, Christoph ;
Luna, Victor M. ;
Stevens, Gregory S. ;
Millette, Amira ;
Shores, Ryan ;
Jimenez, Jessica C. ;
Chen, Briana ;
Hen, Rene .
NATURE, 2018, 559 (7712) :98-+
[2]   Control of Stress-Induced Persistent Anxiety by an Extra-Amygdala Septohypothalamic Circuit [J].
Anthony, Todd E. ;
Dee, Nick ;
Bernard, Amy ;
Lerchner, Walter ;
Heintz, Nathaniel ;
Anderson, David J. .
CELL, 2014, 156 (03) :522-536
[3]   The Mouse Defense Test Battery: pharmacological and behavioral assays for anxiety and panic [J].
Blanchard, DC ;
Griebel, G ;
Blanchard, RJ .
EUROPEAN JOURNAL OF PHARMACOLOGY, 2003, 463 (1-3) :97-116
[4]   Targeting the Microbiota-Gut-Brain Axis: Prebiotics Have Anxiolytic and Antidepressant-like Effects and Reverse the Impact of Chronic Stress in Mice [J].
Burokas, Aurelijus ;
Arboleya, Silvia ;
Moloney, Rachel D. ;
Peterson, Veronica L. ;
Murphy, Kiera ;
Clarke, Gerard ;
Stanton, Catherine ;
Dinan, Timothy G. ;
Cryan, John F. .
BIOLOGICAL PSYCHIATRY, 2017, 82 (07) :472-487
[5]   Resolving the neural circuits of anxiety [J].
Calhoon, Gwendolyn G. ;
Tye, Kay M. .
NATURE NEUROSCIENCE, 2015, 18 (10) :1394-1404
[6]   A detailed ethological analysis of the mouse open field test: effects of diazepam, chlordiazepoxide and an extremely low frequency pulsed magnetic field [J].
Choleris, E ;
Thomas, AW ;
Kavaliers, M ;
Prato, FS .
NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS, 2001, 25 (03) :235-260
[7]   Segregated anatomical input to sub-regions of the rodent superior colliculus associated with approach and defense [J].
Comoli, Eliane ;
Favaro, Plinio Das Neves ;
Vautrelle, Nicolas ;
Leriche, Mariana ;
Overton, Paul G. ;
Redgrave, Peter .
FRONTIERS IN NEUROANATOMY, 2012, 6
[8]   Sedative and anxiolytic effects of methanolic extract from the leaves of Passiflora actinia [J].
Cristina dos Santos, Kely ;
Kurtz, Stella Maris Tessaro Figura ;
Muller, Simony Davet ;
Biavatti, Maique Weber ;
Weffort de Oliveira, Rubia Maria Monteiro ;
Aimbire de Moraes Santos, Cid .
BRAZILIAN ARCHIVES OF BIOLOGY AND TECHNOLOGY, 2006, 49 (04) :565-573
[9]   Computational Neuroethology: A Call to Action [J].
Datta, Sandeep Robert ;
Anderson, David J. ;
Branson, Kristin ;
Perona, Pietro ;
Leifer, Andrew .
NEURON, 2019, 104 (01) :11-24
[10]   Cluster analysis and display of genome-wide expression patterns [J].
Eisen, MB ;
Spellman, PT ;
Brown, PO ;
Botstein, D .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (25) :14863-14868