Molecular characterization of almond cultivars using microsatellite markers

被引:3
作者
Amirbakhtiar, N. [1 ]
Shiran, B. [1 ]
Moradi, H. [2 ]
Sayed-Tabatabaei, B. E. [3 ]
机构
[1] Shahrekord Univ, Dept Agron & Plant Breeding, Fac Agr, Shahrekord, Iran
[2] Agr & Nat Resources Res Ctr Shahrekord, Sect Hort, Shahrekord, Iran
[3] Isfahan Univ Technol, Dept Agrobiotechnol, Coll Agr, Esfahan, Iran
来源
PROCEEDINGS OF THE IVTH INTERNATIONAL SYMPOSIUM ON PISTACHIOS AND ALMONDS | 2006年 / 726期
关键词
molecular markers; fingerprinting; Amygdalus; SSR; genetic diversity;
D O I
10.17660/ActaHortic.2006.726.5
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
In recent years we have witnessed critical advances in the application of molecular markers for genetic fingerprinting in cultivated plants. Their advantages have been widely recognized but they are even more important in woody perennials due to some particularities of these species such as their long generation time, their long individual size and their vegetative propagation. In this work, 36 Iranian and foreign almond cultivars and 3 wild species of Amygdalus have been screened with 32 SSR primers developed in peach, to identify and characterize the genotypes and to study the genetic diversity among them. Amplification of SSR loci was obtained for 26 of the microsatellite primer pairs and 18 of them produced polymorphic amplification patterns. Those primer pairs produced 126 alleles with a mean value of 7 alleles per locus. The results obtained show the usefulness of cross-species transportability of microsatellite sequences. UPGMA cluster analysis of the similarity data grouped the genotypes studied according to their geographic origin and/or their pedigree information.
引用
收藏
页码:51 / +
页数:4
相关论文
共 17 条
[1]   A set of simple-sequence repeat (SSR) markers covering the Prunus genome [J].
Aranzana, MJ ;
Pineda, A ;
Cosson, P ;
Dirlewanger, E ;
Ascasibar, J ;
Cipriani, G ;
Ryder, CD ;
Testolin, R ;
Abbott, A ;
King, GJ ;
Iezzoni, AF ;
Arús, P .
THEORETICAL AND APPLIED GENETICS, 2003, 106 (05) :819-825
[2]   SILVER STAINING OF DNA IN POLYACRYLAMIDE GELS [J].
BASSAM, BJ ;
CAETANOANOLLES, G .
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 1993, 42 (2-3) :181-188
[3]  
Bliss FA, 2002, GENOME, V45, P520, DOI [10.1139/g02-011, 10.1139/G02-011]
[4]   AC/GT and AG/CT microsatellite repeats in peach [Prunus persica (L) Batsch]:: isolation, characterisation and cross-species amplification in Prunus [J].
Cipriani, G ;
Lot, G ;
Huang, WG ;
Marrazzo, MT ;
Peterlunger, E ;
Testolin, R .
THEORETICAL AND APPLIED GENETICS, 1999, 99 (1-2) :65-72
[5]   Development of microsatellite markers in peach [Prunus persica (L.) Batsch] and their use in genetic diversity analysis in peach and sweet cherry (Prunus avium L.) [J].
Dirlewanger, E ;
Cosson, P ;
Tavaud, M ;
Aranzana, MJ ;
Poizat, C ;
Zanetto, A ;
Arús, P ;
Laigret, F .
THEORETICAL AND APPLIED GENETICS, 2002, 105 (01) :127-138
[6]   The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat [J].
Gupta, PK ;
Varshney, RK .
EUPHYTICA, 2000, 113 (03) :163-185
[7]   Molecular characterization and similarity relationships among apricot (Prunus armeniaca L.) genotypes using simple sequence repeats [J].
Hormaza, JI .
THEORETICAL AND APPLIED GENETICS, 2002, 104 (2-3) :321-328
[8]  
Jaccard P., 1908, Bull. Soc. Vaud. Sci. Natur. Bull. Vaud. Soc. Nat. Sci., V44, P223, DOI DOI 10.5169/SEALS-268384
[9]  
Kester D.E., 1996, FRUIT BREEDING, P1
[10]   PCR-AMPLIFICATION AND DETECTION OF THE HUMAN D1S80 VNTR LOCUS - AMPLIFICATION CONDITIONS, POPULATION-GENETICS AND APPLICATION IN FORENSIC ANALYSIS [J].
KLOOSTERMAN, AD ;
BUDOWLE, B ;
DASELAAR, P .
INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 1993, 105 (05) :257-264