Inferring the Effect of Species Interactions on Trait Evolution

被引:5
作者
Xu, Liang [1 ]
Van Doorn, Sander [1 ]
Hildenbrandt, Hanno [1 ]
Etienne, Rampal S. [1 ]
机构
[1] Univ Groningen, Fac Sci & Engn, Groningen Inst Evolutionary Life Sci, POB 11103, NL-9700 CC Groningen, Netherlands
关键词
Approximate Bayesian computation; competition; phylogeny; population dynamics; simulations; species interaction; trait evolution; POPULATION-DENSITY; BODY-SIZE; MODEL; PHYLOGENY; ALLOMETRY; SELECTION; GENETICS;
D O I
10.1093/sysbio/syaa072
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Models of trait evolution form an important part of macroevolutionary biology. The Brownian motion model and Ornstein-Uhlenbeck models have become classic (null) models of character evolution, in which species evolve independently. Recently, models incorporating species interactions have been developed, particularly involving competition where abiotic factors pull species toward an optimal trait value and competitive interactions drive the trait values apart. However, these models assume a fitness function rather than derive it from population dynamics and they do not consider dynamics of the trait variance. Here, we develop a general coherent trait evolution framework where the fitness function is based on a model of population dynamics, and therefore it can, in principle, accommodate any type of species interaction. We illustrate our framework with a model of abundance-dependent competitive interactions against a macroevolutionary background encoded in a phylogenetic tree. We develop an inference tool based on Approximate Bayesian Computation and test it on simulated data (of traits at the tips). We find that inference performs well when the diversity predicted by the parameters equals the number of species in the phylogeny. We then fit the model to empirical data of baleen whale body lengths, using three different summary statistics, and compare it to a model without population dynamics and a model where competition depends on the total metabolic rate of the competitors. We show that the unweighted model performs best for the least informative summary statistic, while the model with competition weighted by the total metabolic rate fits the data slightly better than the other two models for the two more informative summary statistics. Regardless of the summary statistic used, the three models substantially differ in their predictions of the abundance distribution. Therefore, data on abundance distributions will allow us to better distinguish the models from one another, and infer the nature of species interactions. Thus, our framework provides a conceptual approach to reveal species interactions underlying trait evolution and identifies the data needed to do so in practice.
引用
收藏
页码:463 / 479
页数:17
相关论文
共 50 条
  • [41] Strong phylogenetic signal and models of trait evolution evidence phylogenetic niche conservatism for seagrasses
    Tuya, Fernando
    Martinez-Perez, Javier
    Fueyo, Alvaro
    Bosch, Nestor E.
    JOURNAL OF ECOLOGY, 2024, 112 (03) : 446 - 460
  • [42] Linking the Investigations of Character Evolution and Species Diversification
    Magnuson-Ford, Karen
    Otto, Sarah P.
    AMERICAN NATURALIST, 2012, 180 (02) : 225 - 245
  • [43] Early burst in body size evolution is uncoupled from species diversification in diving beetles (Dytiscidae)
    Desamore, Aurelie
    Laenen, Benjamin
    Miller, Kelly B.
    Bergsten, Johannes
    MOLECULAR ECOLOGY, 2018, 27 (04) : 979 - 993
  • [44] Convergence in sympatric swallowtail butterflies reveals ecological interactions as a key driver of worldwide trait diversification
    Puissant, Agathe
    Chotard, Ariane
    Condamine, Fabien L.
    Llaurens, Violaine
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2023, 120 (37)
  • [45] Head shape evolution in monitor lizards (Varanus): interactions between extreme size disparity, phylogeny and ecology
    Openshaw, G. H.
    Keogh, J. S.
    JOURNAL OF EVOLUTIONARY BIOLOGY, 2014, 27 (02) : 363 - 373
  • [46] Inferring Species Trees Directly from Biallelic Genetic Markers: Bypassing Gene Trees in a Full Coalescent Analysis
    Bryant, David
    Bouckaert, Remco
    Felsenstein, Joseph
    Rosenberg, Noah A.
    RoyChoudhury, Arindam
    MOLECULAR BIOLOGY AND EVOLUTION, 2012, 29 (08) : 1917 - 1932
  • [47] Effects of geographical heterogeneity in species interactions on the evolution of venom genes
    Chang, Dan
    Olenzek, Amy M.
    Duda, Thomas F., Jr.
    PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2015, 282 (1805)
  • [48] Spatial and taxonomic correlates of species and species trait assemblages in soil invertebrate communities
    Ponge, J. F.
    Salmon, S.
    PEDOBIOLOGIA, 2013, 56 (03) : 129 - 136
  • [49] Estimating the Effect of Competition on Trait Evolution Using Maximum Likelihood Inference
    Drury, Jonathan
    Clavel, Julien
    Manceau, Marc
    Morlon, Helene
    SYSTEMATIC BIOLOGY, 2016, 65 (04) : 700 - 710
  • [50] Functional groups differ in trait means, but not in trait plasticity to species richness in local grassland communities
    Roscher, Christiane
    Schumacher, Jens
    Lipowsky, Annett
    Gubsch, Marlen
    Weigelt, Alexandra
    Schmid, Bernhard
    Buchmann, Nina
    Schulze, Ernst-Detlef
    ECOLOGY, 2018, 99 (10) : 2295 - 2307