Stability and reproducibility of computed tomography radiomic features extracted from peritumoral regions of lung cancer lesions
被引:50
|
作者:
Tunali, Ilke
论文数: 0引用数: 0
h-index: 0
机构:
H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Bogazici Univ, Inst Biomed Engn, TR-34684 Istanbul, TurkeyH Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Tunali, Ilke
[1
,2
]
Hall, Lawrence O.
论文数: 0引用数: 0
h-index: 0
机构:
Univ S Florida, Dept Comp Sci & Engn, Tampa, FL 33620 USAH Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Hall, Lawrence O.
[3
]
Napel, Sandy
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Radiol, Stanford, CA 94305 USAH Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Napel, Sandy
[4
]
Cherezov, Dmitry
论文数: 0引用数: 0
h-index: 0
机构:
Univ S Florida, Dept Comp Sci & Engn, Tampa, FL 33620 USAH Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Cherezov, Dmitry
[3
]
Guvenis, Albert
论文数: 0引用数: 0
h-index: 0
机构:
Bogazici Univ, Inst Biomed Engn, TR-34684 Istanbul, TurkeyH Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Guvenis, Albert
[2
]
Gillies, Robert J.
论文数: 0引用数: 0
h-index: 0
机构:
H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USAH Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Gillies, Robert J.
[1
]
Schabath, Matthew B.
论文数: 0引用数: 0
h-index: 0
机构:
H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Epidemiol, Tampa, FL 33612 USAH Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Schabath, Matthew B.
[5
]
机构:
[1] H Lee Moffitt Canc Ctr & Res Inst, Dept Canc Physiol, Tampa, FL 33612 USA
Purpose Recent efforts have demonstrated that radiomic features extracted from the peritumoral region, the area surrounding the tumor parenchyma, have clinical utility in various cancer types. However, as like any radiomic features, peritumoral features could also be unstable and/or nonreproducible. Hence, the purpose of this study was to assess the stability and reproducibility of computed tomography (CT) radiomic features extracted from the peritumoral regions of lung lesions where stability was defined as the consistency of a feature by different segmentations, and reproducibility was defined as the consistency of a feature to different image acquisitions. Methods Stability was measured utilizing the "moist run" dataset and reproducibility was measured utilizing the Reference Image Database to Evaluate Therapy Response test-retest dataset. Peritumoral radiomic features were extracted from incremental distances of 3-12 mm outside the tumor segmentation. A total of 264 statistical, histogram, and texture radiomic features were assessed from the selected peritumoral region-of-interests (ROIs). All features (except wavelet texture features) were extracted using standardized algorithms defined by the Image Biomarker Standardisation Initiative. Stability and reproducibility of features were assessed using the concordance correlation coefficient. The clinical utility of stable and reproducible peritumoral features was tested in three previously published lung cancer datasets using overall survival as the endpoint. Results Features found to be stable and reproducible, regardless of the peritumoral distances, included statistical, histogram, and a subset of texture features suggesting that these features are less affected by changes (e.g., size or shape) of the peritumoral region due to different segmentations and image acquisitions. The stability and reproducibility of Laws and wavelet texture features were inconsistent across all peritumoral distances. The analyses also revealed that a subset of features were consistently stable irrespective of the initial parameters (e.g., seed point) for a given segmentation algorithm. No significant differences were found in stability for features that were extracted from ROIs bounded by a lung parenchyma mask versus ROIs that were not bounded by a lung parenchyma mask (i.e., peritumoral regions that extended outside of lung parenchyma). After testing the clinical utility of peritumoral features, stable and reproducible features were shown to be more likely to create repeatable models than unstable and nonreproducible features. Conclusions This study identified a subset of stable and reproducible CT radiomic features extracted from the peritumoral region of lung lesions. The stable and reproducible features identified in this study could be applied to a feature selection pipeline for CT radiomic analyses. According to our findings, top performing features in survival models were more likely to be stable and reproducible hence, it may be best practice to utilize them to achieve repeatable studies and reduce the chance of overfitting.
机构:
Assiut Univ, South Egypt Canc Inst, Nucl Med Unit, Assiut, EgyptAssiut Univ, South Egypt Canc Inst, Nucl Med Unit, Assiut, Egypt
Mostafa, Rehab
Abdelsamie Kandeel, Ahmed
论文数: 0引用数: 0
h-index: 0
机构:
Cairo Univ, Nucl Med Unit, Fac Med, Cairo, EgyptAssiut Univ, South Egypt Canc Inst, Nucl Med Unit, Assiut, Egypt
Abdelsamie Kandeel, Ahmed
Abd Elkareem, Maha
论文数: 0引用数: 0
h-index: 0
机构:
Cairo Univ, Nucl Med Unit, Fac Med, Cairo, EgyptAssiut Univ, South Egypt Canc Inst, Nucl Med Unit, Assiut, Egypt
Abd Elkareem, Maha
Nardo, Lorenzo
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Dept Radiol, 4860 Y St,Suite 3100, Sacramento, CA 95817 USAAssiut Univ, South Egypt Canc Inst, Nucl Med Unit, Assiut, Egypt
Nardo, Lorenzo
Abdelhafez, Yasser G.
论文数: 0引用数: 0
h-index: 0
机构:
Assiut Univ, South Egypt Canc Inst, Nucl Med Unit, Assiut, Egypt
Univ Calif Davis, Dept Radiol, 4860 Y St,Suite 3100, Sacramento, CA 95817 USAAssiut Univ, South Egypt Canc Inst, Nucl Med Unit, Assiut, Egypt
机构:
Univ Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Univ Ulsan, Res Inst Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South KoreaUniv Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Choe, Jooae
Lee, Sang Min
论文数: 0引用数: 0
h-index: 0
机构:
Univ Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Univ Ulsan, Res Inst Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South KoreaUniv Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Lee, Sang Min
Do, Kyung-Hyun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Univ Ulsan, Res Inst Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South KoreaUniv Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Do, Kyung-Hyun
Lee, Jung Bok
论文数: 0引用数: 0
h-index: 0
机构:
Univ Ulsan, Dept Med Stat, Asan Med Ctr, Coll Med, Seoul, South KoreaUniv Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Lee, Jung Bok
Lee, Sang Min
论文数: 0引用数: 0
h-index: 0
机构:
Univ Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Univ Ulsan, Res Inst Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South KoreaUniv Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Lee, Sang Min
Lee, June-Goo
论文数: 0引用数: 0
h-index: 0
机构:
Univ Ulsan, Dept Convergence Med, Asan Med Ctr, Coll Med, Seoul, South KoreaUniv Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Lee, June-Goo
Seo, Joon Beom
论文数: 0引用数: 0
h-index: 0
机构:
Univ Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
Univ Ulsan, Res Inst Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South KoreaUniv Ulsan, Dept Radiol, Asan Med Ctr, Coll Med, 88 Olymp Ro 43 Gil, Seoul 138736, South Korea
机构:
Tianjin Med Univ Canc Inst & Hosp, Dept Pancreat Canc, Tianjin, Peoples R China
Tianjins Clin Res Ctr Canc, Natl Clin Res Ctr Canc, Key Lab Canc Prevent & Therapy, Huan Hu Xi Rd, Tianjin 300060, Peoples R ChinaTianjin Med Univ Canc Inst & Hosp, Dept Pancreat Canc, Tianjin, Peoples R China
Zhou, Bodong
Xu, Jie
论文数: 0引用数: 0
h-index: 0
机构:
Tianjin Med Univ Canc Inst & Hosp, Dept Pancreat Canc, Tianjin, Peoples R China
Tianjins Clin Res Ctr Canc, Natl Clin Res Ctr Canc, Key Lab Canc Prevent & Therapy, Huan Hu Xi Rd, Tianjin 300060, Peoples R China
Tianjin Med Univ Canc Inst & Hosp, Senior Ward, Tianjin, Peoples R ChinaTianjin Med Univ Canc Inst & Hosp, Dept Pancreat Canc, Tianjin, Peoples R China
Xu, Jie
Tian, Ye
论文数: 0引用数: 0
h-index: 0
机构:
Tianjins Clin Res Ctr Canc, Natl Clin Res Ctr Canc, Key Lab Canc Prevent & Therapy, Huan Hu Xi Rd, Tianjin 300060, Peoples R China
Tianjin Med Univ Canc Inst & Hosp, Senior Ward, Tianjin, Peoples R ChinaTianjin Med Univ Canc Inst & Hosp, Dept Pancreat Canc, Tianjin, Peoples R China
Tian, Ye
Yuan, Shuai
论文数: 0引用数: 0
h-index: 0
机构:
Tianjin Med Univ Canc Inst & Hosp, Dept Pancreat Canc, Tianjin, Peoples R China
Tianjins Clin Res Ctr Canc, Natl Clin Res Ctr Canc, Key Lab Canc Prevent & Therapy, Huan Hu Xi Rd, Tianjin 300060, Peoples R ChinaTianjin Med Univ Canc Inst & Hosp, Dept Pancreat Canc, Tianjin, Peoples R China
Yuan, Shuai
Li, Xubin
论文数: 0引用数: 0
h-index: 0
机构:
Tianjins Clin Res Ctr Canc, Natl Clin Res Ctr Canc, Key Lab Canc Prevent & Therapy, Huan Hu Xi Rd, Tianjin 300060, Peoples R China
Tianjin Med Univ Canc Inst & Hosp, Dept Radiol, Huan Hu Xi Rd, Tianjin 300060, Peoples R ChinaTianjin Med Univ Canc Inst & Hosp, Dept Pancreat Canc, Tianjin, Peoples R China
机构:
Univ Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia
Natl Canc Inst, Dept Radiol, Putrajaya 65000, Wilayah Perseku, MalaysiaUniv Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia
Ramli, Zarina
Karim, Muhammad Khalis Abdul
论文数: 0引用数: 0
h-index: 0
机构:
Univ Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia
Natl Canc Inst, Dept Radiol, Putrajaya 65000, Wilayah Perseku, MalaysiaUniv Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia
Karim, Muhammad Khalis Abdul
Effendy, Nuraidayani
论文数: 0引用数: 0
h-index: 0
机构:
Univ Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, MalaysiaUniv Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia
Effendy, Nuraidayani
Abd Rahman, Mohd Amiruddin
论文数: 0引用数: 0
h-index: 0
机构:
Univ Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, MalaysiaUniv Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia
Abd Rahman, Mohd Amiruddin
Kechik, Mohd Mustafa Awang
论文数: 0引用数: 0
h-index: 0
机构:
Univ Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, MalaysiaUniv Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia
Kechik, Mohd Mustafa Awang
Ibahim, Mohamad Johari
论文数: 0引用数: 0
h-index: 0
机构:
Univ Teknol MARA, Fac Med, Sungai Buloh 47200, Selangor, MalaysiaUniv Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia
Ibahim, Mohamad Johari
Haniff, Nurin Syazwina Mohd
论文数: 0引用数: 0
h-index: 0
机构:
Univ Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, MalaysiaUniv Putra Malaysia, Fac Sci, Dept Phys, Serdang 43400, Selangor, Malaysia