Investigations of Microtubule-associated Protein 2 Gene Expression in Spinal Muscular Atrophy

被引:5
作者
Bora, Gamze [1 ]
Sucularli, Ceren [2 ]
Hensel, Niko [3 ]
Claus, Peter [3 ,4 ]
Yurter, Hayat Erdem [1 ]
机构
[1] Hacettepe Univ, Dept Med Biol, Fac Med, Ankara, Turkey
[2] Hacettepe Univ, Dept Bioinformat, Inst Hlth Sci, Ankara, Turkey
[3] Hannover Med Sch, Inst Neuroanat & Cell Biol, OE 4140,Carl Neuberg Str 1, D-30625 Hannover, Germany
[4] Ctr Syst Neurosci ZSN, Hannover, Germany
关键词
Spinal muscular atrophy; exon-array; microtubule-associated protein 2; MOUSE MODEL; SMN; NORMALIZATION; METAANALYSIS; DEFECTS; PATHWAY; GROWTH;
D O I
10.4274/jpr.galenos.2019.71473
中图分类号
R72 [儿科学];
学科分类号
100202 ;
摘要
Aim: Spinal muscular atrophy (SMA) is a devastating genetic disease in childhood andff is caused by the absence of functional survival motor neuron (SMN) protein, which leads to impairments of the cytoskeleton, especially in neurons. Dysregulation of actin dynamics have been linked to SMA patho mechanisms, however involvement of altered microtubule dynamics is largely unknown. In this study, we investigated differentially expressed microtubule-related genes using in vitro and in vivo SMA model systems. Materials and Methods: By focusing on microtubule-related genes, we re-analyzed publically available gene expression arrays, which were previously performed with induced pluripotent stem cell-derived motor neurons of SMA patients and the spinal cords of SMA mice. We found altered expressions of microtubule-associated protein 2 (MAP2), which was validated by real time reverse-transcription polymerase chain reaction using the SMN knock-down NSC34 cell line and the severe SMA mouse model. Results: We showed that the expression of MAP2 gene was significantly upregulated in both expression arrays. Upregulation was also detected in the brain and spinal cord tissues of severe SMA mice at different developmental stages. Conclusion: Our findings suggest that microtubule regulatory proteins may be altered in SMN depleted cells and further research is needed to elucidate the contribution of dysregulated microtubule dynamics towards SMA.
引用
收藏
页码:148 / 154
页数:7
相关论文
共 35 条
  • [1] [Anonymous], 2007, Venny. An Interactive Tool for Comparing Lists with Venn's Diagrams
  • [2] NCBI GEO: archive for functional genomics data sets-update
    Barrett, Tanya
    Wilhite, Stephen E.
    Ledoux, Pierre
    Evangelista, Carlos
    Kim, Irene F.
    Tomashevsky, Maxim
    Marshall, Kimberly A.
    Phillippy, Katherine H.
    Sherman, Patti M.
    Holko, Michelle
    Yefanov, Andrey
    Lee, Hyeseung
    Zhang, Naigong
    Robertson, Cynthia L.
    Serova, Nadezhda
    Davis, Sean
    Soboleva, Alexandra
    [J]. NUCLEIC ACIDS RESEARCH, 2013, 41 (D1) : D991 - D995
  • [3] A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    Bolstad, BM
    Irizarry, RA
    Åstrand, M
    Speed, TP
    [J]. BIOINFORMATICS, 2003, 19 (02) : 185 - 193
  • [4] Smn depletion alters profilin II expression and leads to upregulation of the RhoA/ROCK pathway and defects in neuronal integrity
    Bowerman, Melissa
    Shafey, Dina
    Kothary, Rashmi
    [J]. JOURNAL OF MOLECULAR NEUROSCIENCE, 2007, 32 (02) : 120 - 131
  • [5] NEUROBLASTOMA X SPINAL-CORD (NSC) HYBRID CELL-LINES RESEMBLE DEVELOPING MOTOR NEURONS
    CASHMAN, NR
    DURHAM, HD
    BLUSZTAJAN, JK
    ODA, K
    TABIRA, T
    SHAW, IT
    DAHROUGE, S
    ANTEL, JP
    [J]. DEVELOPMENTAL DYNAMICS, 1992, 194 (03) : 209 - 221
  • [6] Genetic Correction of Human Induced Pluripotent Stem Cells from Patients with Spinal Muscular Atrophy
    Corti, Stefania
    Nizzardo, Monica
    Simone, Chiara
    Falcone, Marianna
    Nardini, Martina
    Ronchi, Dario
    Donadoni, Chiara
    Salani, Sabrina
    Riboldi, Giulietta
    Magri, Francesca
    Menozzi, Giorgia
    Bonaglia, Clara
    Rizzo, Federica
    Bresolin, Nereo
    Comi, Giacomo P.
    [J]. SCIENCE TRANSLATIONAL MEDICINE, 2012, 4 (165)
  • [7] Dehmelt L, 2005, GENOME BIOL, V6
  • [8] Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    Edgar, R
    Domrachev, M
    Lash, AE
    [J]. NUCLEIC ACIDS RESEARCH, 2002, 30 (01) : 207 - 210
  • [9] Deletion analysis in Turkish patients with spinal muscular atrophy
    Erdem, H
    Pehlivan, S
    Topaloglu, H
    Özgüç, M
    [J]. BRAIN & DEVELOPMENT, 1999, 21 (02) : 86 - 89
  • [10] Altered levels and distribution of microtubule-associated proteins before disease onset in a mouse model of amyotrophic lateral sclerosis
    Farah, CA
    Nguyen, MD
    Julien, JP
    Leclerc, N
    [J]. JOURNAL OF NEUROCHEMISTRY, 2003, 84 (01) : 77 - 86