Synthesis and characterization of a sequence-specific DNA-binding protein that contains ruthenium polypyridyl centers

被引:22
作者
Lasey, RC
Banerji, SS
Ogawa, MY [1 ]
机构
[1] Bowling Green State Univ, Dept Chem, Bowling Green, OH 43403 USA
[2] Bowling Green State Univ, Ctr Photochem Sci, Bowling Green, OH 43403 USA
[3] Med Coll Ohio, Dept Biochem & Mol Biol, Toledo, OH 43614 USA
基金
美国国家卫生研究院;
关键词
ruthenium; de novo protein; bZIP; GCN-4; DNA;
D O I
10.1016/S0020-1693(99)00589-7
中图分类号
O61 [无机化学];
学科分类号
070301 ; 081704 ;
摘要
A chimeric metallo-bZIP protein, (GBR-CC)Ru, was prepared that contains the native DNA-binding domain of the GCN-4 transcription factor (GBR), a synthetic alpha-helical coiled-coil dimerization site (CC), and a ruthenium polypyridyl complex (Ru) attached to a surface-exposed cysteine residue. The photophysical properties of the peptide-bound ruthenium complex include a long-lived emission that is shortened when the peptide is dissolved in air-saturated water. Electrophoretic mobility shift assays show that the chimeric metalloprotein also retains the essential DNA recognition properties of the native GCN-4 transcriptional activator. Peptide-DNA complexes are formed with the related AP1 and CRE sequences, but not the divergent Spl sequence. Peptide titration studies indicate that the affinities of (GBR-CC)Ru for the AP1 and CRE sites are comparable. Steady-state photolysis experiments show that (GBR-CC)Ru does not produce photoinduced DNA damage, probably due to the separation distance between the ruthenium sites and the DNA. bases. (C) 2000 Elsevier Science S.A. All rights reserved.
引用
收藏
页码:822 / 828
页数:7
相关论文
共 22 条
[1]   Photocleavage of nucleic acids [J].
Armitage, B .
CHEMICAL REVIEWS, 1998, 98 (03) :1171-1200
[2]  
Ausubel FM., 1998, CURRENT PROTOCOLS MO
[3]   CONVERSION OF LAMBDA PHAGE CRO INTO AN OPERATOR-SPECIFIC NUCLEASE [J].
BRUICE, TW ;
WISE, JG ;
ROSSER, DSE ;
SIGMAN, DS .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1991, 113 (14) :5446-5447
[4]   Long-lifetime Ru(II) complexes as labeling reagents for sulfhydryl groups [J].
Castellano, FN ;
Dattelbaum, JD ;
Lakowicz, JR .
ANALYTICAL BIOCHEMISTRY, 1998, 255 (02) :165-170
[5]   DETERMINATION OF HELIX AND BETA-FORM OF PROTEINS IN AQUEOUS-SOLUTION BY CIRCULAR-DICHROISM [J].
CHEN, YH ;
YANG, JT ;
CHAU, KH .
BIOCHEMISTRY, 1974, 13 (16) :3350-3359
[6]   DESIGN OF A METALLO BZIP-PROTEIN THAT DISCRIMINATES BETWEEN CRE AND AP1 TARGET SITES - SELECTION AGAINST AP1 [J].
CUENOUD, B ;
SCHEPARTZ, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (04) :1154-1159
[7]   CONVERSION OF A HELIX-TURN-HELIX MOTIF SEQUENCE-SPECIFIC DNA-BINDING PROTEIN INTO A SITE-SPECIFIC DNA CLEAVAGE AGENT [J].
EBRIGHT, RH ;
EBRIGHT, YW ;
PENDERGRAST, PS ;
GUNASEKERA, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (08) :2882-2886
[8]   CRYSTAL-STRUCTURE OF THE HETERODIMERIC BZIP TRANSCRIPTION FACTOR C-FOS-C-JUN BOUND TO DNA [J].
GLOVER, JNM ;
HARRISON, SC .
NATURE, 1995, 373 (6511) :257-261
[9]   Amino terminal Cu(II)- and Ni(II)-binding (ATCUN) motif of proteins and peptides: Metal binding, DNA cleavage, and other properties [J].
Harford, C ;
Sarkar, B .
ACCOUNTS OF CHEMICAL RESEARCH, 1997, 30 (03) :123-130
[10]   The designed protein M(II)-Gly-Lys-His-Fos(138-211) specifically cleaves the AP-1 binding site containing DNA [J].
Harford, C ;
Narindrasorasak, S ;
Sarkar, B .
BIOCHEMISTRY, 1996, 35 (14) :4271-4278