MicroRNAs and Their Regulatory Roles in Plant-Environment Interactions

被引:524
作者
Song, Xianwei [1 ,2 ,3 ]
Li, Yan [4 ,5 ]
Cao, Xiaofeng [1 ,2 ,3 ]
Qi, Yijun [4 ,5 ]
机构
[1] Chinese Acad Sci, Inst Genet & Dev Biol, CAS Ctr Excellence Mol Plant Sci, State Key Lab Plant Genom, Beijing 100101, Peoples R China
[2] Chinese Acad Sci, Inst Genet & Dev Biol, CAS Ctr Excellence Mol Plant Sci, Natl Ctr Plant Gene Res, Beijing 100101, Peoples R China
[3] Univ Chinese Acad Sci, Coll Life Sci, Beijing 100039, Peoples R China
[4] Tsinghua Univ, Sch Life Sci, Ctr Plant Biol, Beijing 100084, Peoples R China
[5] Tsinghua Peking Ctr Life Sci, Beijing 100084, Peoples R China
来源
ANNUAL REVIEW OF PLANT BIOLOGY, VOL 70 | 2019年 / 70卷
基金
国家重点研发计划; 中国国家自然科学基金;
关键词
plant; miRNA; DICER-LIKE; ARGONAUTE; gene regulation; development; stress; DICER-LIKE; 1; MEDIATED TRANSLATIONAL REPRESSION; NITROGEN LIMITATION ADAPTATION; SYMBIOTIC NODULE DEVELOPMENT; ABIOTIC STRESS TOLERANCE; SMALL-INTERFERING RNAS; BINDING-PROTEIN HYL1; MESSENGER-RNA; TRANSCRIPTION FACTOR; PHOSPHATE HOMEOSTASIS;
D O I
10.1146/annurev-arplant-050718-100334
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
MicroRNAs (miRNAs) are 20-24 nucleotide noncoding RNAs abundant in plants and animals. The biogenesis of plant miRNAs involves transcription of miRNA genes, processing of primary miRNA transcripts by DICER-LIKE proteins into mature miRNAs, and loading of mature miRNAs into ARGONAUTE proteins to form miRNA-induced silencing complex (miRISC). By targeting complementary sequences, miRISC negatively regulates gene expression, thereby coordinating plant development and plant-environment interactions. In this review, we present and discuss recent updates on the mechanisms and regulation of miRNA biogenesis, miRISC assembly and actions as well as the regulatory roles of miRNAs in plant developmental plasticity, abiotic/biotic responses, and symbiotic/parasitic interactions. Finally, we suggest future directions for plant miRNA research.
引用
收藏
页码:489 / 525
页数:37
相关论文
共 297 条
[1]   MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in arabidopsis [J].
Abdel-Ghany, Salah E. ;
Pilon, Marinus .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (23) :15932-15945
[2]   A Quick HYL1-Dependent Reactivation of MicroRNA Production Is Required for a Proper Developmental Response after Extended Periods of Light Deprivation [J].
Achkar, Natalia P. ;
Cho, Seok Keun ;
Poulsen, Christian ;
Arce, Agustin L. ;
Re, Delfina A. ;
Giudicatti, Axel J. ;
Karayekov, Elizabeth ;
Ryu, Moon Young ;
Choi, Suk Won ;
Harholt, Jesper ;
Casal, Jorge J. ;
Yang, Seong Wook ;
Manavella, Pablo A. .
DEVELOPMENTAL CELL, 2018, 46 (02) :236-+
[3]   Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome [J].
Addo-Quaye, Charles ;
Eshoo, Tifani W. ;
Bartel, David P. ;
Axtell, Michael J. .
CURRENT BIOLOGY, 2008, 18 (10) :758-762
[4]   MicroRNA156 improves drought stress tolerance in alfalfa (Medicago sativa) by silencing SPL13 [J].
Arshad, Muhammad ;
Feyissa, Biruk A. ;
Amyot, Lisa ;
Aung, Banyar ;
Hannoufa, Abdelali .
PLANT SCIENCE, 2017, 258 :122-136
[5]   pho2, a phosphate overaccumulator, is caused by a nonsense mutation in a MicroRNA399 target gene [J].
Aung, Kyaw ;
Lin, Shu-I ;
Wu, Chia-Chune ;
Huang, Yu-Ting ;
Su, Chun-Lin ;
Chiou, Tzyy-Jen .
PLANT PHYSIOLOGY, 2006, 141 (03) :1000-1011
[6]   Evolution of plant microRNAs and their targets [J].
Axtell, Michael J. ;
Bowman, John L. .
TRENDS IN PLANT SCIENCE, 2008, 13 (07) :343-349
[7]   miR393-Mediated Auxin Signaling Regulation is Involved in Root Elongation Inhibition in Response to Toxic Aluminum Stress in Barley [J].
Bai, Bin ;
Bian, Hongwu ;
Zeng, Zhanghui ;
Hou, Ning ;
Shi, Bo ;
Wang, Junhui ;
Zhu, Muyuan ;
Han, Ning .
PLANT AND CELL PHYSIOLOGY, 2017, 58 (03) :426-439
[8]   MicroRNA binding sites in Arabidopsis class IIIHD-ZIP mRNAs are required for methylation of the template chromosome [J].
Bao, N ;
Lye, KW ;
Barton, MK .
DEVELOPMENTAL CELL, 2004, 7 (05) :653-662
[9]   Functional mapping of the plant small RNA methyltransferase: HEN1 physically interacts with HYL1 and DICER-LIKE 1 proteins [J].
Baranauske, Simona ;
Mickute, Milda ;
Plotnikova, Alexandra ;
Finke, Andreas ;
Venclovas, Ceslovas ;
Klimasauskas, Saulius ;
Vilkaitis, Giedrius .
NUCLEIC ACIDS RESEARCH, 2015, 43 (05) :2802-2812
[10]   PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants [J].
Bari, Rajendra ;
Pant, Bikram Datt ;
Stitt, Mark ;
Scheible, Wolf-Ruediger .
PLANT PHYSIOLOGY, 2006, 141 (03) :988-999