Wilson disease tissue classification and characterization using seven artificial intelligence models embedded with 3D optimization paradigm on a weak training brain magnetic resonance imaging datasets: a supercomputer application

被引:40
作者
Agarwal, Mohit [1 ]
Saba, Luca [2 ]
Gupta, Suneet K. [1 ]
Johri, Amer M. [3 ]
Khanna, Narendra N. [4 ]
Mavrogeni, Sophie [5 ]
Laird, John R. [6 ]
Pareek, Gyan [7 ]
Miner, Martin [8 ]
Sfikakis, Petros P. [9 ]
Protogerou, Athanasios [10 ]
Sharma, Aditya M. [11 ]
Viswanathan, Vijay [12 ]
Kitas, George D. [13 ]
Nicolaides, Andrew [14 ]
Suri, Jasjit S. [15 ]
机构
[1] Bennett Univ, CSE Dept, Greater Noida, UP, India
[2] Azienda Osped Univ AOU, Dept Radiol, Cagliari, Italy
[3] Queens Univ, Dept Med, Div Cardiol, Kingston, ON, Canada
[4] Indraprastha APOLLO Hosp, Dept Cardiol, New Delhi, India
[5] Onassis Cardiac Surg Ctr, Cardiol Clin, Athens, Greece
[6] Adventist Hlth St Helena, Heart & Vasc Inst, St Helena, CA USA
[7] Brown Univ, Minimally Invas Urol Inst, Providence, RI 02912 USA
[8] Miriam Hosp Providence, Mens Hlth Ctr, Providence, RI USA
[9] Natl Kapodistrian Univ Athens, Rheumatol Unit, Athens, Greece
[10] Natl & Kapodistrian Univ Athens, Dept Cardiovasc Prevent, Athens, Greece
[11] Univ Virginia, Div Cardiovasc Med, Charlottesville, VA USA
[12] MV Hosp Diabet & Prof M Viswanathan Diabet Res Ct, Chennai, Tamil Nadu, India
[13] Dudley Grp NHS Fdn Trust, R&D Acad Affairs, Dudley, England
[14] Univ Nicosia, Vasc Screening & Diagnost Ctr, Nicosia, Cyprus
[15] AtheroPoint, Stroke Monitoring & Diagnost Div, Roseville, CA 95661 USA
基金
英国科研创新办公室;
关键词
Wilson's disease; Artificial intelligence; Deep learning; Machine learning; Transfer learning; Three-dimensional optimization; Performance; Stability; Reliability; Diagnostic ratio; STROKE RISK STRATIFICATION; MACHINE LEARNING FRAMEWORK; CAROTID ULTRASOUND; LIVER-DISEASE; ATHEROSCLEROTIC PLAQUE; ATP7B GENE; DIAGNOSIS; FEATURES; CONNECTIVITY; STRATEGY;
D O I
10.1007/s11517-021-02322-0
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Wilson's disease (WD) is caused by copper accumulation in the brain and liver, and if not treated early, can lead to severe disability and death. WD has shown white matter hyperintensity (WMH) in the brain magnetic resonance scans (MRI) scans, but the diagnosis is challenging due to (i) subtle intensity changes and (ii) weak training MRI when using artificial intelligence (AI). Design and validate seven types of high-performing AI-based computer-aided design (CADx) systems consisting of 3D optimized classification, and characterization of WD against controls. We propose a "conventional deep convolution neural network" (cDCNN) and an "improved DCNN" (iDCNN) where rectified linear unit (ReLU) activation function was modified ensuring "differentiable at zero." Three-dimensional optimization was achieved by recording accuracy while changing the CNN layers and augmentation by several folds. WD was characterized using (i) CNN-based feature map strength and (ii) Bispectrum strengths of pixels having higher probabilities of WD. We further computed the (a) area under the curve (AUC), (b) diagnostic odds ratio (DOR), (c) reliability, and (d) stability and (e) benchmarking. Optimal results were achieved using 9 layers of CNN, with 4-fold augmentation. iDCNN yields superior performance compared to cDCNN with accuracy and AUC of 98.28 +/- 1.55, 0.99 (p < 0.0001), and 97.19 +/- 2.53%, 0.984 (p < 0.0001), respectively. DOR of iDCNN outperformed cDCNN fourfold. iDCNN also outperformed (a) transfer learning-based "Inception V3" paradigm by 11.92% and (b) four types of "conventional machine learning-based systems": k-NN, decision tree, support vector machine, and random forest by 55.13%, 28.36%, 15.35%, and 14.11%, respectively. The AI-based systems can potentially be useful in the early WD diagnosis.
引用
收藏
页码:511 / 533
页数:23
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