GPU-optimized Direct Fourier Method for On-line Tomography

被引：5

作者：

Shkarin, Roman ^{[1
,2
]}

Ametova, Evelina ^{[2
]}

Chilingaryan, Suren ^{[1
]}

Dritschler, Timo ^{[1
]}

Kopmann, Andreas ^{[1
]}

Mirone, Alessandro ^{[3
]}

Shkarin, Andrei ^{[1
]}

Vogelgesang, Matthias ^{[1
]}

Tsapko, Sergey ^{[2
]}

机构：

[1] Karlsruhe Inst Technol, Inst Data Proc & Elect, D-76131 Baden, Switzerland

[2] Tomsk Polytech Univ, Dept Automat & Comp Syst, Tomsk, Russia

[3] European Synchrotron Radiat Facil, Grenoble, France

来源：

FUNDAMENTA INFORMATICAE | 2015年 / 141卷 / 2-3期

关键词：

computed tomography; image reconstruction; parallel-beam tomography; FFT; RECONSTRUCTION;

D O I：

10.3233/FI-2015-1274

中图分类号：

TP31 [计算机软件];

学科分类号：

081202 ; 0835 ;

摘要：

On-line monitoring of synchrotron 3D-imaging experiments requires very fast tomographic reconstruction. Direct Fourier methods (DFM) have the potential to be faster than standard Filtered Backprojection. We have evaluated multiple DFMs using various interpolation techniques. We compared reconstruction quality and studied the parallelization potential. A method using Direct Fourier Inversion (DFI) and a sinc-based interpolation was selected and parallelized for execution on GPUs. Several optimization steps were considered to boost the performance. Finally we evaluated the achieved performance for the latest generation of GPUs from NVIDIA and AMD. The results show that tomographic reconstruction with a throughput of more than 1.5 GB/sec on a single GPU is possible.

引用

页码：245 / 258

页数：14

共 43 条

[21] A Weighted Convex Optimized Phase Retrieval Method for Short-Time Fourier Transform Measurement With Outliers
Fu, Ning
Li, Xiaodong
Zheng, Pinjun
Qiao, Liyan
IEEE TRANSACTIONS ON INSTRUMENTATION AND MEASUREMENT, 2023, 72
[22] GPU-accelerated non-uniform fast Fourier transform-based compressive sensing spectral domain optical coherence tomography
Xu, Daguang
Huang, Yong
Kang, Jin U.
OPTICS EXPRESS, 2014, 22 (12): : 14871 - 14884
[23] A novel method for dendrochronology of large historical wooden objects using line trajectory X-ray tomography
Bossema, Francien G.
Dominguez-Delmas, Marta
Palenstijn, Willem Jan
Kostenko, Alexander
Dorscheid, Jan
Coban, Sophia Bethany
Hermens, Erma
Batenburg, K. Joost
SCIENTIFIC REPORTS, 2021, 11 (01)
[24] Fourier transform-based iterative method for differential phase-contrast computed tomography
Cong, Wenxiang
Momose, Atsushi
Wang, Ge
OPTICS LETTERS, 2012, 37 (11) : 1784 - 1786
[25] A Straight-line Trajectory Tomography Method Based on Multiple Tilted X-ray Cone-beams
Fu, Jian
Zhang, Junwei
Tan, Renbo
MEASUREMENT TECHNOLOGY AND ITS APPLICATION, PTS 1 AND 2, 2013, 239-240 : 238 - 242
[26] On-Line Fluorescence Microscopy for Identification and Imaging of Apoptotic Cell with Synchrotron-Based Soft X-ray Tomography
Zhang, Chao
Wu, Zhao
Dang, Zheng
Tian, Lijiao
Guan, Yong
Liu, Gang
Tian, Yangchao
MICROMACHINES, 2023, 14 (02)
[27] Fourier method for 3-dimensional data fusion of X-ray Computed Tomography and ultrasound
Leach, William
Lum, Jordan
Champley, Kyle
Azevedo, Stephen
Gardner, Casey
Kim, Hyojin
Stobbe, David
Townsend, Andrew
Tringe, Joseph W.
NDT & E INTERNATIONAL, 2022, 127
[28] Reconstruction for 3D PET Based on Total Variation Constrained Direct Fourier Method
Yu, Haiqing
Chen, Zhi
Zhang, Heye
Wong, Kelvin Kian Loong
Chen, Yunmei
Liu, Huafeng
PLOS ONE, 2015, 10 (09):
[29] Photon-Measurement Density Function of Fluorescence Molecular Tomography Based on Direct Method
Quan Guo-Tao
Gong Hui
Fu Jian-Wei
Deng Yong
CHINESE PHYSICS LETTERS, 2010, 27 (11)
[30] Cone-beam computed tomography for on-line image guidance of lung stereotactic radiotherapy: Localization, verification, and intrafraction tumor position
Purdie, Thomas G.
Bissonnette, Jean-Pierre
Franks, Kevin
Bezjak, Andrea
Payne, David
Sie, Fanny
Sharpe, Michael B.
Jaffray, David A.
INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 2007, 68 (01): : 243 - 252

← 1 2 3 4 5 →