Crystal structures of cyanide complexes of P450cam and the oxygenase domain of inducible nitric oxide synthase - structural models of the short-lived oxygen complexes

被引:53
作者
Fedorov, R
Ghosh, DK
Schlichting, I
机构
[1] Max Planck Inst Mol Physiol, Biophys Chem Abt, D-44227 Dortmund, Germany
[2] Duke Univ, Durham, NC 27713 USA
[3] VA Med Ctr, Durham, NC 27713 USA
[4] Max Planck Inst Med Res, Abt Biomol Mechanismen, D-69120 Heidelberg, Germany
关键词
hemoprotein; oxygen analogue; crystal structure; nitric oxide synthase; CYP; monooxygenase; oxygen; X-ray radiolysis; reaction mechanism;
D O I
10.1016/S0003-9861(02)00555-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of the ternary cyanide complex of P450cam and camphor was determined to 1.8 Angstrom resolution and found to be identical with the structure of the active oxygen complex [I. Schlichting et al., 2000, Science 287, 1615]. Notably, cyanide binds in a bent mode and induces the active conformation that is characterized by the presence of two water molecules and a flip of the carbonyl of the conserved Asp251. The structure of the ternary complex of cyanide, L-arginine, and the oxygenase domain of inducible nitric oxide synthase was determined to 2.4 Angstrom resolution. Cyanide binds essentially linearly, interacts with L-Arg, and induces the binding of a water molecule at the active site. This water is positioned by backbone interactions, located 2.8 Angstrom from the nitrogen atom of cyanide, and could provide a proton required for O-O bond scission in the hydroxylation reaction of nitric oxide synthase. (C) 2002 Elsevier Science (USA). All rights reserved.
引用
收藏
页码:25 / 31
页数:7
相关论文
共 70 条
[1]   The ferrous-dioxy complex of neuronal nitric oxide synthase - Divergent effects of L-arginine and tetrahydrobiopterin on its stability [J].
AbuSoud, HM ;
Gachhui, R ;
Raushel, FM ;
Stuehr, DJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (28) :17349-17353
[2]   KINETIC SOLVENT ISOTOPE EFFECTS DURING OXYGEN ACTIVATION BY CYTOCHROME P-450CAM [J].
AIKENS, J ;
SLIGAR, SG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (03) :1143-1144
[3]   Nitric oxide synthases: structure, function and inhibition [J].
Alderton, WK ;
Cooper, CE ;
Knowles, RG .
BIOCHEMICAL JOURNAL, 2001, 357 (03) :593-615
[4]   Structures of tetrahydrobiopterin binding-site mutants of inducible nitric oxide synthase oxygenase dimer and implicated roles of Trp457 [J].
Aoyagi, M ;
Arvai, AS ;
Ghosh, S ;
Stuehr, DJ ;
Tainer, JA ;
Getzoff, ED .
BIOCHEMISTRY, 2001, 40 (43) :12826-12832
[5]   Reduced oxy intermediate observed in D251N cytochrome P450(cam) [J].
Benson, DE ;
Suslick, KS ;
Sligar, SG .
BIOCHEMISTRY, 1997, 36 (17) :5104-5107
[6]   The catalytic pathway of horseradish peroxidase at high resolution [J].
Berglund, GI ;
Carlsson, GH ;
Smith, AT ;
Szöke, H ;
Henriksen, A ;
Hajdu, J .
NATURE, 2002, 417 (6887) :463-468
[7]   A mechanism essential to life [J].
Borman, S .
CHEMICAL & ENGINEERING NEWS, 1999, 77 (49) :31-+
[8]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[9]   NEUTRON-DIFFRACTION STUDY OF CARBONMONOXYMYOGLOBIN [J].
CHENG, XD ;
SCHOENBORN, BP .
JOURNAL OF MOLECULAR BIOLOGY, 1991, 220 (02) :381-399
[10]   NATURE OF O-2 AND CO BINDING TO METALLOPORPHYRINS AND HEME PROTEINS [J].
COLLMAN, JP ;
BRAUMAN, JI ;
HALBERT, TR ;
SUSLICK, KS .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1976, 73 (10) :3333-3337