Differential Morpho-Physiological and Transcriptomic Responses to Heat Stress in Two Blueberry Species

被引:9
作者
Callwood, Jodi [1 ]
Melmaiee, Kalpalatha [1 ]
Kulkarni, Krishnanand P. [1 ]
Vennapusa, Amaranatha R. [1 ]
Aicha, Diarra [1 ]
Moore, Michael [2 ]
Vorsa, Nicholi [3 ]
Natarajan, Purushothaman [4 ,5 ]
Reddy, Umesh K. [4 ,5 ]
Elavarthi, Sathya [1 ]
机构
[1] Delaware State Univ, Dept Agr & Nat Resources, Dover, DE 19901 USA
[2] Delaware State Univ, Optic Sci Ctr Appl Res OSCAR, Dover, DE 19901 USA
[3] Rutgers State Univ, Philip E Marucci Ctr Blueberry & Cranberry Res &, Chatsworth, NJ 08019 USA
[4] West Virginia State Univ, Dept Biol, Institute, WV 25112 USA
[5] West Virginia State Univ, Gus R Douglass Inst, Institute, WV 25112 USA
基金
美国农业部;
关键词
blueberry; differentially expressed genes; heat stress; RNAseq; pathway analysis; VACCINIUM-CORYMBOSUM; HIGH-TEMPERATURE; GENE-EXPRESSION; CD-HIT; METABOLIC-RESPONSES; ANALYSIS REVEALS; PHOTOSYSTEM-II; ARABIDOPSIS; PROTEIN; THERMOTOLERANCE;
D O I
10.3390/ijms22052481
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Blueberries (Vaccinium spp.) are highly vulnerable to changing climatic conditions, especially increasing temperatures. To gain insight into mechanisms underpinning the response to heat stress, two blueberry species were subjected to heat stress for 6 and 9 h at 45 degrees C, and leaf samples were used to study the morpho-physiological and transcriptomic changes. As compared with Vaccinium corymbosum, Vaccinium darrowii exhibited thermal stress adaptation features such as small leaf size, parallel leaf orientation, waxy leaf coating, increased stomatal surface area, and stomatal closure. RNAseq analysis yielded similar to 135 million reads and identified 8305 differentially expressed genes (DEGs) during heat stress against the control samples. In V. corymbosum, 2861 and 4565 genes were differentially expressed at 6 and 9 h of heat stress, whereas in V. darrowii, 2516 and 3072 DEGs were differentially expressed at 6 and 9 h, respectively. Among the pathways, the protein processing in the endoplasmic reticulum (ER) was the highly enriched pathway in both the species: however, certain metabolic, fatty acid, photosynthesis-related, peroxisomal, and circadian rhythm pathways were enriched differently among the species. KEGG enrichment analysis of the DEGs revealed important biosynthesis and metabolic pathways crucial in response to heat stress. The GO terms enriched in both the species under heat stress were similar, but more DEGs were enriched for GO terms in V. darrowii than the V. corymbosum. Together, these results elucidate the differential response of morpho-physiological and molecular mechanisms used by both the blueberry species under heat stress, and help in understanding the complex mechanisms involved in heat stress tolerance.
引用
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页码:1 / 23
页数:23
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