Identification of a Unique "Stability Control Region" that Controls Protein Stability of Tropomyosin: A Two-stranded α-Helical Coiled-coil

被引:23
作者
Hodges, Robert S. [1 ]
Mills, Janine [1 ]
McReynolds, Susanna [3 ]
Kirwan, J. Paul [1 ]
Tripet, Brian [1 ]
Osguthorpe, David [2 ]
机构
[1] Univ Colorado, Dept Biochem & Mol Genet, Sch Med, Aurora, CO 80045 USA
[2] Univ Colorado, Dept Pharmacol, Sch Med, Aurora, CO 80045 USA
[3] Univ Colorado, Dept Microbiol, Sch Med, Aurora, CO 80045 USA
关键词
protein stability; tropomyosin; two-stranded alpha-helical coiled-coils; stability control sites; stability control region; INTERHELICAL SALT BRIDGES; AMINO-ACID SUBSTITUTIONS; GCN4; LEUCINE-ZIPPER; HYDROPHOBIC CORE; CHAIN-LENGTH; OLIGOMERIZATION-STATE; ELECTROSTATIC INTERACTIONS; ION-PAIRS; QUATERNARY STRUCTURE; RELATIVE POSITIONS;
D O I
10.1016/j.jmb.2009.07.039
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Nine recombinant chicken skeletal a-tropomyosin proteins were prepared, eight C-terminal deletion constructs and the full length protein (1-81, 1-92, 1-99, 1-105, 1-110, 1-119, 1-131, 1-260 and 1-284) and characterized by circular dichroism spectroscopy and analytical ultracentrifugation. We identified for the first time, a stability control region between residues 97 and 118. Fragments of tropomyosin lacking this region (1-81, 1-92, and 199) still fold into two-stranded alpha-helical coiled-coils but are significantly less stable (T-m, between 26-28.5 degrees C) than longer fragments containing this region (1-119,1-131,1-260 and 1-284) which show a large increase in their thermal midpoints (T-m 40-43 degrees C) for a Delta T-m of 16-18 degrees C between 1-99 and 1-119. We further investigated two additional fragments that ended between residues 99 and 119, that is fragments 1-105 and 1-110. These fragments were more stable than 1-99 and less stable than 1-119, and showed that there were three separate sites that synergistically contribute to the large jump in protein stability (electrostatic clusters 97-104 and 112-118, and a hydrophobic interaction from Leu 110). All the residues involved in these stabilizing interactions are located outside the hydrophobic core a and d positions that have been shown to be the major contributor to coiled-coil stability. Our results show clearly that protein stability is more complex than previously thought and unique sites can synergistically control protein stability over long distances. (C) 2009 Elsevier Ltd. All rights reserved.
引用
收藏
页码:747 / 762
页数:16
相关论文
共 104 条
[1]   Structure of the leucine zipper [J].
Alber, Tom .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 1992, 2 (02) :205-210
[2]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[3]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[4]   Helix capping [J].
Aurora, R ;
Rose, GD .
PROTEIN SCIENCE, 1998, 7 (01) :21-38
[5]   Is protein folding hierarchic? I. Local structure and peptide folding [J].
Baldwin, RL ;
Rose, GD .
TRENDS IN BIOCHEMICAL SCIENCES, 1999, 24 (01) :26-33
[6]   Deciphering the design of the tropomyosin molecule [J].
Brown, JH ;
Kim, KH ;
Jun, G ;
Greenfield, NJ ;
Dominguez, R ;
Volkmann, N ;
Hitchcock-DeGregori, SE ;
Cohen, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (15) :8496-8501
[7]   The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges [J].
Burkhard, P ;
Kammerer, RA ;
Steinmetz, MO ;
Bourenkov, GP ;
Aebi, U .
STRUCTURE, 2000, 8 (03) :223-230
[8]   Improving coiled-coil stability by optimizing ionic interactions [J].
Burkhard, P ;
Ivaninskii, S ;
Lustig, A .
JOURNAL OF MOLECULAR BIOLOGY, 2002, 318 (03) :901-910
[9]  
CHAKRABARTTY A, 1994, PROTEIN SCI, V3, P843
[10]   The role of unstructured highly charged regions on the stability and specificity of dimerization of two-stranded α-helical coiled-coils:: Analysis of the neck-hinge region of the kinesin-like motor protein Kif3A [J].
Chana, M ;
Tripet, BP ;
Mant, CT ;
Hodges, RS .
JOURNAL OF STRUCTURAL BIOLOGY, 2002, 137 (1-2) :206-219