Development of a loop-mediated isothermal amplification assay targeting lmo0753 gene for detection of Listeria monocytogenes in wastewater

被引:12
作者
Nathaniel, B. R. [1 ]
Ghai, M. [1 ]
Druce, M. [1 ]
Maharaj, I. [1 ]
Olaniran, A. O. [2 ]
机构
[1] Univ KwaZulu Natal, Coll Agr Engn & Sci, Sch Life Sci, Discipline Genet, Westville Campus, Durban, South Africa
[2] Univ KwaZulu Natal, Coll Agr Engn & Sci, Sch Life Sci, Discipline Microbiol, Westville Campus, Durban, South Africa
基金
新加坡国家研究基金会;
关键词
Listeria monocytogenes; lmo0753; gene; Loop mediated isothermal amplification; treated wastewater; rapid detection; RAPID DETECTION; URBAN; EFFLUENTS; TIME;
D O I
10.1111/lam.13200
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Contaminated wastewater plays an important role in the transmission of Listeria monocytogenes in the environment. In this study, a loop-mediated isothermal amplification (LAMP) assay for sensitive detection of L. monocytogenes in wastewater from treatment plants was developed, validated and compared to conventional PCR. The lmo0753 gene which codes for a Crp/Fnr family transcription factor, was targeted to design four specific primers to detect L. monocytogenes in 60 min at 63 degrees C in a water bath. Amplification products were visualized by agarose gel electrophoresis. The detection limit of the LAMP assay was 65 fg mu l(-1) of DNA and 38 CFU per ml. Conventional PCR was 10 times less sensitive than LAMP assay with primers targeting the HlyA gene. A total of 70 crude wastewater samples collected at different treatment stages (aeration tank, pre chlorination and post chlorination), were tested directly by LAMP and PCR. Samples from aeration and pre-chlorination stages tested positive with LAMP and culture method but not with conventional PCR. LAMP assay was tolerant to inhibitors present in wastewater and circumvented the need for isolation of pure DNA for detection. Both LAMP assay and culture method failed to detect L. monocytogenes in post-chlorinated wastewater, confirming the efficiency of the treatment process in the removal of L. monocytogenes.
引用
收藏
页码:264 / 270
页数:7
相关论文
共 25 条
[1]  
Alemayehu S., 2015, APPL J HYG, V4, P18
[2]  
Barbau-Piednoir E, 2013, APPL MICROBIOL BIOT, V97, P9811, DOI [10.1007/s00253-013-5234-x, 10.1007/s00253-012-4477-2]
[3]  
Budzinska K, 2012, POL J ENVIRON STUD, V21, P31
[4]  
Costa A.P.R. da., 2014, Am. J. Anal. Chem, P1057, DOI DOI 10.4236/AJAC.2014.516112
[5]   Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification [J].
Deng, Xiangyu ;
Phillippy, Adam M. ;
Li, Zengxin ;
Salzberg, Steven L. ;
Zhang, Wei .
BMC GENOMICS, 2010, 11
[6]  
Jalali M., 2013, INT J ENV HLTH ENG, V2, P49, DOI [10.4103/2277-9183.122447, DOI 10.4103/2277-9183.122447]
[7]   Tolerance of loop-mediated isothermal amplification to a culture medium and biological substances [J].
Kaneko, Hisatoshi ;
Kawana, Takashi ;
Fukushima, Eiko ;
Suzutani, Tatsuo .
JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS, 2007, 70 (03) :499-501
[8]  
Lingwei Wu, 2008, 2008 2nd International Conference on Bioinformatics and Biomedical Engineering (ICBBE '08), P375
[9]   Development of a Loop-Mediated Isothermal Amplification Assay Based on lmo0460 Sequence for Detection of Listeria monocytogenes [J].
Liu, Zhanmin ;
Zhu, Jiachao ;
Xia, Xueying ;
Wang, Lin ;
Yang, Cuiyun ;
Li, Xiaohong .
JOURNAL OF FOOD SAFETY, 2015, 35 (03) :362-369
[10]   Distribution and characteristics of Listeria monocytogenes isolates from surface waters of the South Nation River watershed, Ontario, Canada [J].
Lyautey, Emilie ;
Lapen, David R. ;
Wilkes, Graham ;
McCleary, Katherine ;
Pagotto, Franco ;
Tyler, Kevin ;
Hartmann, Alain ;
Piveteau, Pascal ;
Rieu, Aurlie ;
Robertson, William J. ;
Medeiros, Diane T. ;
Edge, Thomas A. ;
Gannon, Victor ;
Topp, Edward .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (17) :5401-5410